Pseudochaenichthys georgianus (South Georgia icefish): 117450829
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Entry
117450829 CDS
T09629
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117450829 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117450829 (srebf1)
04131 Membrane trafficking [BR:
pgeo04131
]
117450829 (srebf1)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
117450829 (srebf1)
Membrane trafficking [BR:
pgeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117450829 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
117450829 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
117450829
NCBI-ProteinID:
XP_033944706
LinkDB
All DBs
Position
8:24417172..24433241
Genome browser
AA seq
1236 aa
AA seq
DB search
MNSMSFDDPSLDNLDPTLSLHDPNDIDTALLSDIDDMLQLINNQDMEFGGLFDNPPYTVP
LPTQELPGLSLVQSIILPSPPTTTTTSVPPPPPSSSILSSSPHLDALLGPPIIRSSSTPD
KAFQPPTFQLSPLAKVPNSTQRLQPASPPQAQALRQPQVEQPQPILSPSAPAKAASPHGS
PTPNPAFTSTPQAIFTAPAPTSPPPPQPLPQLQPQQQALHIQPQSQQILINYSTVNSYTT
ASPSSVSQPTTILSSSPPSIQPMTIQAQLQGLTTTSPLMATSVSPPMQTIAPNVQQVQQV
QQVQQVQQVQQVQQVQQMQQVQQVQQMQQVQQVQQMQQMQQVPLLLQPQFIKAESLLLTT
MASSTSLSSTTPVQSTSLQRSLPFQAFMGGGTILTTVPVMMDTDKMPINRIAISGKPFGV
PHKGEKRTAHNAIEKRYRSSINDKILELKDMVAGSEAKLNKSAVLRKTLDYIRFLQSTNQ
KLKQENMAFKMAAQKNKSLKDLVAMEVDTPADVKNELPTPPASDVGSPTSFSHCSSDSEP
DSPMVEDTKQPTVGIVDKSAAGGSAGGMLDRSRMALCAFTFLFLSLNPLAALLCASGSSS
AGSSAATPHTGRSVLGVDIAAESWGWMDWMLPTLLVWLVNGVLVSGVLVRLLVYGEPVTR
PHSGSSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPISQLDLACSALWSLLR
FCLQRLWVGRWLAARAGGLRSDRPLKEDACKSSRDAALVYHRLHQLHMTGKLNGSHLSAV
HMALSAVNLAECAGSCLPVASLAEVYVSAALRVKASMPRILHFTSRVFLSSARQACLSSS
GSVPPAMQWLCHPLGHRFFVDGDWAIRSTPKESIYSQAGNTVDPLAQVTQAFREHLLEKA
LYCVAQPHGEKSPDQGEGEYADALEYLQLLISASDAAGATSQSFAIGSNMATVTGCDPHS
KWWSSVTVVIINWLQGDDAAAERLYPTVEHLPRSLQNAESLLPKACLNTFRAVRALLSKP
ENCQLSLSYSDKASALLRDSLNLGPHCHSSSLDKVVQLLLCDLLLVMRTNVWRLQQQGAG
PAGSGLVGTSGPAGVHQASPPELQGFQQDLSSLRKLAHSFRPAMRRLFLHEATARLMAGA
SPTRTHQLLDRSLRRRATPGAKTEECETRPGQREQAEAVMLACRYLPPSFLSAPGQRVGM
LADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTNS
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcatgtcttttgacgatccttcgttggataacttggatccaactctatcgctt
catgacccgaatgatattgacacggctctcctaagcgacattgatgacatgctacagctc
atcaacaaccaggacatggagtttggaggactgtttgataaccccccatacacagtgccc
cttcccacccaagagcttcctggattgagtctagtccagtctatcatcttaccttcccct
ccaaccaccaccaccacttctgtacctccacctccaccttcctcctccatcctaagcagt
agcccccacctggatgcactcctgggccctcccatcatccgcagctcctccaccccagac
aaggccttccagcctcccacctttcagctgtcccccctggccaaggtacccaactccaca
caaaggcttcagccggcctcccccccacaggcccaggccctcagacagccccaggtggag
cagccacaacccattctcagcccgtcggccccggcaaaggcagcttcacctcatggatca
ccaacaccaaacccagctttcacctccacgcctcaggccatcttcactgcgccagccccg
acatctcctcctccgccccagcccctgcctcagcttcagccccagcaacaggcacttcat
atccagcctcagtcccaacagatcctgatcaactacagcaccgtgaacagctacacaact
gccagtcccagcagtgtgagccaacccaccaccatcctgtcatcctcgcctccaagtatt
cagccaatgaccatccaggctcagctccaagggctgaccaccacgtctcccctcatggcc
acgtcagtgagcccgccgatgcaaaccatcgcacccaacgtgcagcaagtgcagcaagtg
cagcaagtgcagcaagtgcagcaagtgcagcaagtgcagcaagtgcagcaaatgcagcaa
gtacagcaagtacagcaaatgcagcaagtgcagcaagtacagcaaatgcagcaaatgcag
caagtacctttgttgctgcagccgcagttcatcaaggcggagtctctgctgctgactact
atggcttcctccacctccctgtccagcaccaccccagtacagagcacttcactgcagcgg
tctttgcccttccaggcctttatgggcggtggcaccatcctgaccacggtgccagtcatg
atggacactgataagatgcccattaaccgcattgccatcagcggcaagccgtttggcgtg
ccacacaagggagagaagcgcacagcccacaatgcaattgagaagcgttaccggtcctct
attaatgacaaaattctcgagctcaaagatatggtggctggttccgaggccaagctcaac
aagtctgcagtgctgaggaaaaccctcgattacatccgtttcctgcagtcgaccaaccag
aagctcaaacaggagaacatggcgtttaaaatggccgcccagaaaaacaagtctctcaag
gacctggttgccatggaggtcgatacaccggctgatgtgaagaatgagctgcccacccca
cctgcttctgacgtgggctcccccacctctttctctcactgtagcagtgactcagagccc
gacagtccgatggtggaggacactaagcagcctacggtgggcatcgtggacaaatccgca
gcaggaggcagcgctggtggcatgttggaccgttcccgcatggcgttgtgcgccttcacc
ttcctcttcctctctctcaaccctctggctgccctgctctgcgcatccggcagcagctca
gctggaagctcagcagccacacctcacacaggaaggagcgtcctgggcgtggatatcgca
gcggagtcgtggggctggatggactggatgctgccaaccttactggtgtggctggtgaac
ggtgttctggtgtcaggggttctggtccgactgctggtgtatggagagcctgtaaccaga
ccacactctggatcctctgtgttgttctggaggcaccgcaagcaggctgacctggacctg
gctagaggagatttcgcccaggccagtcagaacctgtggacgtgtctaaaggctcttggt
cgtcccttacccatctcccagttggacctggcctgttctgcgctctggtccctgctaagg
ttctgcctccagcgcctctgggtgggccgctggttggctgccagggcaggagggctgcgg
tctgaccgccccctgaaggaggacgcctgcaaaagcagccgggacgccgctctggtttac
caccgcctgcaccagcttcacatgacaggtaagctgaatggcagccacctgtcagcagtg
cacatggctctgagtgcagtgaacctggcagagtgtgctggctcctgtctgcctgtagcc
agtctggctgaggtctacgtgtccgcagctctacgggtcaaagccagcatgccaaggatc
ctgcattttacttctcgtgttttcctgagcagcgcccgccaggcgtgcctgtcgtccagc
ggcagcgttcctccagctatgcagtggctgtgtcaccctctaggtcatcgcttctttgtg
gatggggattgggctattcgcagcactcctaaagaaagcatctacagccaggcgggcaat
actgtggatcctctggcccaggtgactcaggctttcagggaacacctcctggagaaagcg
ctgtactgtgtggctcagcctcacggagagaagagccccgaccagggagaaggggagtat
gctgatgccctggagtatctccagttgttgataagtgcatcagatgctgctggagccacc
tcccagtcctttgccatcggctccaatatggccactgtgaccggctgcgacccccactcc
aagtggtggtcctcggttaccgtggtgattatcaattggctccaaggagatgacgccgca
gcagagagactgtacccaactgttgagcacctgccgcgcagcctgcagaacgcagagagt
ctcctgcccaaggcgtgtctgaacacattcagggcggtgcgggctctgctgtccaaacct
gaaaactgccagctgagtctgagctacagcgacaaggccagcgctctgcttcgagacagc
ctcaacctcggaccccactgccacagctccagtttagacaaggttgtccagttgctcttg
tgtgatctcctgttggtgatgaggaccaacgtgtggcgcctgcagcagcagggggccggt
cctgcggggtcagggttggtgggcaccagcggccctgcgggggtccaccaggcctcccca
ccggagctccaaggctttcagcaagatctcagctccctacgcaaactggcacacagcttc
agacctgcaatgcggagattgttccttcatgaagctacagccaggctgatggcgggggcc
agtcccacccgcacacatcagctcctggatcgctcgctgcgacgcagggcaacgcccgga
gccaaaacagaggagtgcgagacgcggccgggccagcgggagcaggcggaggctgtgatg
ctggcgtgccgctaccttcccccctccttcctttcggcccccggccaacgggtgggcatg
ctggcagacgctgcccgcaccctggagaagctgggagacaagaggaccctccacgactgc
cagcaaatgatcatcaagctgggcagcggcactactgtcaccaacagctag
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