Pseudochaenichthys georgianus (South Georgia icefish): 117450876
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Entry
117450876 CDS
T09629
Symbol
setd1a
Name
(RefSeq) histone-lysine N-methyltransferase SETD1A
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00310
Lysine degradation
pgeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117450876 (setd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117450876 (setd1a)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
117450876 (setd1a)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117450876 (setd1a)
HMT complexes
COMPASS/SET1 complex
117450876 (setd1a)
COMPASS/SET1 complex (yeast)
117450876 (setd1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
117450876
NCBI-ProteinID:
XP_033944768
LinkDB
All DBs
Position
8:17291444..17316802
Genome browser
AA seq
2191 aa
AA seq
DB search
MDPDGGADSQKAVSLQWQSYKLVQDPAIRRVAQKIYRYDGVHFSVPDSGFPPIGELRDPR
PRRLWSRYTEMSLPVPKFKLDEFYVGPIPLKEVSFARLNDNIKEPFLAEMCAKFGEVEEM
EILFHPKTRKHLGLARVLFTSTRGAKDTVKHLHNTSVMGNIIHAQLDIKGQQRQKYYDLM
VNGSYTPQTVPLGGKALTDRLPPPAPAPAPAPAPAPTQPQPDTSSEVRRRLSSDLAVLAA
GVQALTSGSADPSSGDTGFSDQRLDTPPSSMSGPFTPGSTASSQGAGGGTPYSSRSGTPF
SQDSGYTGGRHTGYNTVTLGSGYPPQDMLPSSSSSSAVSSTVGGHKASRFSEEAQEPSVF
HRGRPIYPPNTSYRPNEPPCYPPYPNAGGPGPHIAHHSSMPPPPLAAQFDQPPMSDRDRD
RDSAGRYGPAGIGSRRSSYHQQDTNSSTKYHSHHSHHHSERREDRAYRRDSLGSRSGDHG
HQKHRNHHHSHNHHGSSSHRRSSHDRDRDRDRDRDSDYSNSSDPRYNSNSYRSSSNSMSP
PPSSYSAYPSSKEPAPPQGLDASTRLAGTSLAERGSLPSVGADKDYHPGHHSALPPPPPP
APAPLPPASVIAAAVAETLGTLDFNQDSPAREEQWTKPKRRPSTPPAPPKTPPPTSPPHP
PIASSSTSPSSTSLPHHLPSSSSSPPQRDSSSPEPDSTNESLPFVYHSSSLDSRIEMLLK
EQKAKFSFLASDEEDEEDRKEEKQRGVRGEGDRRGDGTGEHTSGNLVGDNGEKDHRKKGE
RDRGRKRGKGGDGRKSPSLHTAAIPSSSSYSSHNPTEETQKQVGLTGAMQEESSQTGSAD
TRSRTGAHTPPYNGQSQSSPHSSGEDMEISDEEEEVTTITTVTSHQASLTSGSSPCSSQA
AMPSRTTDHSSSPQPDSAQHFGTSMHPPISSYPPHLPLPPGYSLQPPPPPGIPPLSHMEL
HSEYPPMPHHMYDYASSMELMNQYSGGAPMSFQMQTHMLSRLHQLRVSSSNGTPGPGEAA
TADYSSYHLHPMPPPHTHHPYMDQEGSGAGAHYDQDHRYMPTHMPYPYPDPHSTQIAHPP
HHGIPPPHTGWPPHVLPPHYASYMPPPGYGTMLPGEGDEYRAPEGEEMSMLPENPHEATV
QMVLGTLIQEMKNIMQRDLNRKMVENVAFATFDEWWERKETKAKPFQTMVRGVSALRDDE
KKEEKINRPREPHTSLVDWAKSGGMEGFSLRGPVRLPSFKVKRKEPQELQEGDMKRPRPS
TPPDEDDEARAGRMPEASRHGAERDNKRRKKKPRSRKPWELGSEGEETSDGSSTEKEDEE
GSEKASDDDALSADSDDESLSSSSDGSSSSGSTSSSSSEDEDEEEGERAESEGPDSMDDS
TMDSTSEKHGRENNAGAFSKAEVKTGETKDSKPDTKTAPSKRPPSPPYPRPSSPIVLVPP
LKKRRKTVSFSTGENDSKMQLPTAPVSPSPSQLSGESPFFSPGRHPDSPVTASPSPTSRP
SKGIQLLPFASKPGEGNALIVPPSGYQDLDESKKGPPASPQTPPIKSAGKRGTGKDSPKS
PIPPGMVCRTVQNLPLDHASLCRMAFEEAPPNHPANKRSRGRPRTTSLSASSSHSLREED
EDVEESEQRLRLREQLGASSLLQLASASTTDLSVLADVALKMDPDTGDSEETETSDEAEE
QKMEGDLFSSESLARVMSQEGIFVITEHNYCKPPVLTVPSGTKRTSSKQDPSVLLPADLN
NISGVLEAPEEVIGEALSSRGDKGEFLSTMGVLCESEDAGQAASLPPSSKKKAIAGKGLE
LEKDMSKKWRRKDKENLELQKEQPGSKKQRKRKLEDSEEEVDVEELESGELSSSDTEDDM
VEDVRKSERLFLQEAGVTSSQRWPKPAPASEPSAIKYDNRSEFEQMTILYDIWNTGLDGE
DLSLLKKTYEKLLQDNHSSDWLNDTHWVNHTITNLPNPRRKKKNPGQLRQHVTGSARSEG
YYAISRKEKDVYLDLDLPEQVIREVENVDLSGANRVLSERRSEQRRLLTAIGTTAVVDSD
LLKLNQLKYRKKRLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQMVADNREKRYAQ
QGIGSSYLFRVDHDTIIDATKVGNLARFINHCCTPNCYAKVITIESQKKIVIYSKQAIAV
NEEITYDYKFPLEDNKIPCLCGTENCRGTLN
NT seq
6576 nt
NT seq
+upstream
nt +downstream
nt
atggatccagacggtggggcagattctcaaaaagctgtcagtttgcagtggcagagctac
aaacttgtccaggatccagccatccggcgagttgcacagaaaatctacagatatgatgga
gtgcatttcagtgtgccagactctggatttcctcccatcggtgaactgcgggaccctaga
ccccggagactatggtccaggtatacagaaatgtccctgccagtgcccaagtttaagctt
gatgagttctatgtgggtcccatacccctcaaggaggtgagctttgctagactgaatgac
aacatcaaggagccctttctggcagaaatgtgtgcaaaatttggtgaggtggaggagatg
gagatcctgtttcaccccaagaccaggaagcacttgggcctggccagggtgttgtttacc
agcaccagaggagctaaggacacagtcaagcatctgcacaacacttctgtcatgggtaac
atcattcatgctcaactggatataaaaggccagcagaggcaaaagtattatgacctgatg
gtaaacgggtcctacactcctcagacggtgcccctgggaggcaaggctttgactgacagg
ctcccgcctccagccccagccccagcaccagccccagcaccagcaccgacgcagccacag
cctgacacgtcatcagaagtcaggcggaggctttccagtgaccttgcagttttggcagca
ggggtccaggccctaacgtcaggaagtgcagacccttcctctggggatactggtttcagt
gatcagcgtctggacacgcccccctcttccatgtcgggacccttcacaccaggctccact
gcctcatctcagggtgctggaggaggaacaccatacagctccagatctgggactcctttc
tcacaagactcgggctacactggcggaaggcatactggctacaacactgtcactttgggc
agtggctaccctccccaggacatgctaccttcgtcctcctcgtcttctgcagtctcgtct
actgttggaggacacaaagcatctcgcttctcggaggaggcacaggaaccttcagtgttt
caccgaggtcgccctatataccccccaaacacatcataccgtcccaacgagccgccatgc
taccccccataccccaatgctggagggcctgggccacacattgcgcaccactcctcaatg
cctcctccacctcttgccgcccaatttgatcagcccccaatgtcagacagggaccgtgac
agagactcggcggggcgctatgggccggcggggatcggctccagaaggtcatcctaccac
cagcaagacacaaactcttccacaaagtaccattcccatcactcccatcaccactcggag
cgcagggaggacagggcataccggcgagacagcctgggctcccggtctggtgaccatggc
caccagaaacaccgcaaccaccaccattcacacaaccaccacggcagcagcagccacaga
aggagcagccatgaccgggacagagatagagacagggacagagacagtgactactccaac
agctctgaccccagatacaattctaactcctaccgttcttcctcgaacagcatgtctcct
cccccctcatcttactccgcatacccctcctccaaagagccagcccctcctcagggattg
gacgcttccacccgtcttgcaggcacaagccttgcagagaggggctccctgccgtcggtt
ggtgctgacaaagactaccaccctggtcaccacagtgctcttcctccaccgcctcccccc
gcgccggcccccctcccgccagcctcagtcatagcagcggctgtagctgagacactggga
acgctggacttcaaccaggatagtccggcccgggaagagcagtggacaaagccaaagcgc
cgtccaagcacgccaccagcacccccgaaaacgcctccgcctacctccccgccccaccct
cccattgcttcttcctccacgtccccttcctctacctcccttccccaccatcttccctct
tcctccagctccccacctcagcgtgactcctcctctccagagccagattccaccaatgag
agtctaccgttcgtctaccacagcagcagcctggactctcgtattgagatgctcctcaaa
gaacagaaggcgaagttttctttccttgcctccgatgaggaggatgaagaagataggaag
gaggagaagcagaggggtgtacgtggggaaggagatcgaagaggtgatgggacaggggag
cacacaagtggtaacctggtgggagacaatggtgagaaggaccacaggaagaaaggggaa
agagacagaggaaggaagcggggaaaggggggagatggtaggaagagtcccagtttacat
acagcagccataccatcctcttcctcctactcctctcacaaccccacagaggaaacccaa
aaacaggttggcctcactggagctatgcaggaggaatcttcacagactggatctgctgat
acacgcagcaggacaggagcacacacaccaccttacaatggacagagtcagtcctcccct
cactcctcaggcgaagacatggagatctcagacgaggaagaggaggtgactaccataaca
acagtgacctcccaccaggcctccctcacctcaggttcctcaccatgttcctcccaggct
gccatgccttcacgaacaacagaccactcatcttcgccccaaccagactctgcacagcac
tttggcacctccatgcaccctcccatatcttcctaccctcctcatttgccacttcctcct
ggttactccctccaacccccacctccgcccgggatccctcccctttcccacatggagctg
cactccgagtatcctcccatgccccaccacatgtatgactatgcctcgtccatggagctg
atgaaccagtacagcggtggagctccaatgtctttccagatgcagacccacatgctcagt
cgcctacaccagctgagggtgtcgtcctccaacggcacccccggccccggtgaggcagcc
actgcagactactcctcctaccatctccaccctatgccgccaccccacacacaccacccc
tatatggaccaagaggggagtggagcaggcgctcattatgaccaagaccaccgctacatg
cccacccatatgccctacccctacccagacccccacagcacccagatagcacaccctcca
caccatggcatcccgcctccccatactggctggccgccgcacgtcttgccgccccactac
gcctcttacatgccccccccgggctatggcaccatgctgcccggggagggagacgagtac
agggctccagagggggaggagatgtctatgttgcctgaaaatccacatgaagccacagtg
cagatggtcctgggcactctgatccaggaaatgaaaaacatcatgcagagggacctgaac
cgcaaaatggtggagaacgttgcctttgcgacttttgacgagtggtgggagaggaaagag
accaaggccaagcctttccagacaatggttagaggggtgtctgcattacgggatgatgag
aaaaaagaggaaaagatcaaccgtcctcgggagcctcatacgtctctcgtggactgggcg
aagagcggtggcatggaagggttctctctccgaggaccagtccgacttccttccttcaag
gtaaagaggaaagaaccgcaggagcttcaagagggagacatgaagaggccacggccctcg
accccaccagacgaggatgacgaagctcgtgcggggagaatgccagaggcaagcagacat
ggagctgaaagagacaacaagaggaggaaaaagaagccaagaagtcgtaaaccttgggag
ctgggcagcgagggagaggaaacatctgatggctcctccactgaaaaggaggatgaagag
ggaagtgaaaaggcatctgatgatgatgcccttagtgctgatagtgacgatgagagcctc
tcctcgtcctctgacggctcttcatcttcaggatctacatcttcgtcttcctctgaagat
gaggatgaagaggaaggagagagggctgagagcgaagggccagactccatggatgattcg
accatggacagcacaagcgaaaaacatggcagggaaaataatgcaggtgctttttcaaag
gcagaagtcaaaacaggtgaaaccaaggacagcaagccagatacaaaaacagcacccagc
aagcgtcctccatcgcccccgtacccacggccttcgtcccctattgttcttgtgccccct
ctcaagaaacgcaggaagactgtctctttctcaacaggcgagaacgacagcaaaatgcag
ctgccgactgcacccgtgtctccatctccctcccaactgtcaggtgaatctccctttttc
tcccctgggaggcacccagactctcccgtcaccgcttctccatcacccacatctcgtccc
tctaagggcatccaactgcttccctttgcctccaaaccaggtgaaggcaatgccctcatt
gtgcccccgtctggataccaagatttggatgaatccaaaaaaggaccccctgcttctcct
cagaccccccctatcaaatccgctgggaaacggggtacaggaaaagattcccccaaatct
cccatccctcctggtatggtgtgccgcactgtgcagaacctgccattggaccacgcctct
ctgtgcaggatggccttcgaggaggcccctccgaaccatcccgccaacaaacggtccaga
ggcaggcctcggaccaccagcttgtctgcgtcctccagtcactccctcagagaggaagac
gaggatgtggaagaaagtgaacagaggttgagactcagagagcagcttggggcatcgagc
ctcctgcagctggcctcggcttcaaccactgacctgtccgtgttggctgacgttgctttg
aaaatggaccctgacaccggggactccgaggagacggagacatctgacgaggcagaagag
cagaagatggaaggtgatctcttctcctcagagtctctggcccgggtaatgagccaagag
ggtatatttgtcattacggaacacaactactgcaaacctcctgttctcacagtaccgtcc
ggtaccaaaaggacttcctccaaacaagacccttcagtcttgcttccagcagaccttaac
aatatttctggggtgcttgaagcgccagaggaggtcattggagaagccctttcatccaga
ggagataaaggggaattcttatccacaatgggagtgctttgtgagtctgaggatgcaggc
caggctgcatctctaccgccatcgtcaaagaagaaggccatagctgggaaaggtcttgaa
cttgaaaaggatatgagcaaaaagtggagaaggaaagacaaagaaaacctcgagcttcag
aaggagcagccaggaagtaagaaacagaggaagcggaaactagaggactcagaagaagag
gtggatgtggaggagcttgagtctggggagctttctagctcagacacagaggacgatatg
gttgaagacgttaggaagagcgagcgtctcttcctgcaggaggccggggtaacatcgtcc
cagcgctggcccaaacctgcccctgcatccgagccatcagccattaagtatgacaaccgc
agtgagtttgagcagatgaccatcctgtatgatatctggaacacgggtctggacggcgag
gacttgagtttgctgaagaagacttatgagaagctgttacaggacaaccacagctcggac
tggctcaacgacacccactgggtcaatcacaccataaccaatttgccgaacccccggcgt
aaaaagaagaacccaggacagctgcgtcagcatgtgactggttcagccagaagtgagggc
tactacgccatcagccgcaaggagaaggacgtctatctggacctggacctgccggagcag
gtcattcgggaggtggagaatgtggacctctcgggagcaaaccgggtgctgtcagagaga
cgctcagagcagcgccgcctcctcaccgccatcggcacaacggcggtcgtggactctgac
ctgctcaaactcaaccagctgaagtaccgaaaaaagaggcttcgtttcggacgcagcaga
atccacgagtggggtcttttcgccatggagcccatagctgctgatgagatggtcatcgag
tacgtgggtcagaacatccgacagatggtggctgacaatcgagagaagcggtacgcgcag
cagggcatcgggagcagctacctgttcagagtggaccacgataccattattgatgccaca
aaagttggcaacctggcaagattcatcaaccactgctgcactccaaactgctacgccaag
gtaatcacaatagagtcccagaaaaagattgtgatctactcgaagcaggccatcgctgtc
aacgaggagatcacctacgactacaagttccctctggaggacaacaagatcccctgcctg
tgtgggacggagaactgccgcgggacactgaactag
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integrated database retrieval system
