Pseudochaenichthys georgianus (South Georgia icefish): 117450882
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Entry
117450882 CDS
T09629
Symbol
ap5z1
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117450882 (ap5z1)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117450882 (ap5z1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Phage_TAC_14
Motif
Other DBs
NCBI-GeneID:
117450882
NCBI-ProteinID:
XP_033944777
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Position
8:30834114..30851318
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AA seq
818 aa
AA seq
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MYSHGSESLIKQAREIQDSELQKFYSRLVKLLQGKELGYETVDSLQRLHLILSANKYIRT
LPPELQKRLQSLLSSPAEPFQVLSSAVLRETLPPAAHSGNYSQENIVQLNSHAVALLLSQ
AGSRADVSSLCTQLLRGLESRQSEGPTNSLSHTLPILNTILTHNPGCLTEDHVTLLSKKL
VDWLRYASILQGGGASSGGFFTGPRSRQPVPIAELDGTVSGDFFTVLCVGQSFTEDQWMN
VFSFSALRHWLLTYHSVSNGNADTAHRLQLSLSLSLSHSFSNDDRSEVDGSVVSMVSVTS
SCGRLLPPKERLREKSFQYCQRLIEQSDRKAHKKSDADLQKACLVEAVCILDCVCEEDAS
LVFRAFPCIKALFGRLSSDLSFARVLLPIAQFYLNHGEMAAVDCGSVWALVFGRFPSELF
SDPFLAHELLRFLRLNLESLQLRVPQYTHSFPNLLKFLAWDSPAVVDDFVDLLPSLVTAG
TAVELLHTLLDLPCLSATLVLQVRSTCLPISEQSGRGLLSLDAFRSPSFRGLFLFLLRGQ
AGSGDTIDRLSTLHELLVETADWPRVVQCAQIVPVLLHIFFNTVITVADEKLLAHLILVM
LERSSLLLNIPKYNKEIHRVFSSHLLRLCKLHPSLVMDQSHELLEFSGATANVYSKEEIY
THVVWVLGEYLSVSCDSRCSVTLITSCFEALEAVLFEITSSVPPPGADCPAPRVVTTLMS
ALAKLASRSHDLIPRVSLFLSKLRTVTRDGSVAWCSDEEDLVAIVTRGEELWSLLKAPGV
AQSVLTPPAHVTTPQWHRDTNVALPLRLRTLTNLTHSH
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtactctcacggctcagagagtttaattaaacaagcaagggagatccaggactctgag
ctgcagaagttctacagccggctggtgaagctgctccaggggaaggagctgggttacgag
acggtggactcgctgcagcggctgcacctcatcctctccgccaacaagtacatccggacg
ttgcctccagagcttcagaagaggcttcagtcgctcctctcctccccagccgagccgttt
caggtgctgagctcagcggtgctcagagagacgctgccacctgctgctcactcagggaac
tacagccaggagaacatcgtccagctgaacagccatgctgtcgccctgctgctctctcag
gcagggtccagggcagacgtgtcgtctctctgcactcagctccttcggggtctggagagc
cgtcaatcagaggggccgaccaactcgctctcacacactctgcccatcctcaacaccatc
ctcacacacaaccccgggtgcctcactgaagatcacgtgaccctcctgagtaaaaagctt
gttgattggctgcgttatgcgagcatccttcagggaggcggggcttcctctggaggattc
ttcacagggccgaggtcacgtcagccggtgccgatagcggagctggacggcaccgtgtcg
ggcgacttcttcacggtgctgtgtgtggggcagagcttcacggaggaccagtggatgaac
gtcttctccttctccgcgctgcgccactggctgctcacctaccactcggtttctaacggc
aacgcggacactgctcacaggctgcagctcagcctctccctctccctctcccactccttc
tctaatgatgaccgttcggaggtggatggatcggtggtttccatggtttctgtgacttcc
tcctgcggccgcctgctgcctccgaaggagcgtctgagagagaaatccttccagtactgc
cagcgcctcatcgagcagagcgaccgcaaggcgcacaaaaagtcggatgcagacctgcag
aaagcgtgtctcgtggaggcggtgtgtatcctggactgtgtgtgtgaggaagacgcctcg
ctggtcttccgggcgtttccgtgcatcaaggcgctgttcggtcggctgagctcagatctg
tcgttcgctcgggtgctgctgcccatcgcccagttctacctcaaccacggcgagatggct
gcagtggattgtgggtcggtgtgggcgctggtgttcggtcgctttccctccgaactcttc
agcgaccccttcctcgctcacgagctcctgcgcttcctccgactgaacctcgagagtctg
cagctccgagtgccgcagtacacacactccttccctaacctgctgaagttcttggcgtgg
gacagcccggcggtggtggatgattttgtggacctgctgccctctctggtgacggctggt
actgcagtggagctgctgcacactctgctggacctgccctgtctgtccgccacgctggtg
ctgcaagtcaggtcaacttgtttgcccatctctgagcagagtggccgtggcctcctgtca
ctcgatgcctttcgaagcccgtctttcagagggcttttcctcttcctgctgagagggcag
gcgggctcaggagacacaatcgaccgactgagcacgctccatgagctgctggtggagact
gctgattggccgagagttgttcagtgtgcccagatcgtccctgtgctgttgcacattttt
ttcaacactgttattacggtagcagatgagaagctcttagctcacctgatcctggtgatg
ctggagagaagcagcctcctcctcaacatccccaaatacaacaaagagatacacagggtg
ttcagctcccacctgctgaggctgtgtaagctgcacccctctctggtcatggatcagtcc
cacgagttgctggagttctctggagccacggccaacgtgtacagcaaggaggaaatctac
actcatgtggtgtgggtgctgggagaatacctctcggtgtcatgtgactcccgctgctcc
gtgacactcatcacttcctgtttcgaggcgttggaggcggtgctgtttgagatcacgtcc
tccgtccccccgcccggcgcagactgccccgcccccagagtcgtcaccactctgatgagc
gctctggccaagctggcgtcgcgatcacatgacctcatacccagggtgtctctgttcctc
tccaagctgagaacggtcaccagagacgggtcagtcgcctggtgctccgatgaagaagac
cttgttgccatagtaacgcgaggcgaggagttgtggtcgctgctaaaagcccccggtgta
gctcagagcgtcctgaccccccctgcacacgtcaccaccccccagtggcacagagacacc
aacgtggccttacctctccgactgaggaccctcacaaacctcacacactcacattaa
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