KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117450911
Entry
117450911         CDS       T09629                                 
Symbol
dcaf7
Name
(RefSeq) DDB1- and CUL4-associated factor 7
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    117450911 (dcaf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pgeo04121]
    117450911 (dcaf7)
   03036 Chromosome and associated proteins [BR:pgeo03036]
    117450911 (dcaf7)
Ubiquitin system [BR:pgeo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117450911 (dcaf7)
Chromosome and associated proteins [BR:pgeo03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     117450911 (dcaf7)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR3_1st WD40 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd WD40_RFWD3 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd DSE1_N MIOS_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta WDR55 EIF3I Beta-prop_WDR41 Beta-prop_NOL10_N WD_LRWD1 WD40_MABP1-WDR62_2nd PAC11
Other DBs
NCBI-GeneID: 117450911
NCBI-ProteinID: XP_033944827
LinkDB
Position
8:complement(17277426..17281324)
AA seq 342 aa
MSLHGKRKEIYKYDAPWTVYAMSWSIRPDKRFRLALGSFVEEYNNKVQLVGLEEESSEFV
CRNTFDHPYPTTKIMWIPDTKGVYPDLLATSGDYLRIWRVSDTETRLECLLNNNKNSDFC
APLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDI
AFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATM
AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMP
RAIDDPILAYTAEGEINNVQWACTQPDWIAICYNNCLEILRV
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgtcgcttcacggaaaaaggaaagaaatctacaaatacgacgcgccatggactgtttat
gcgatgagctggagcatccggccagacaaacgctttcggctggcactcgggagttttgtg
gaggagtacaacaacaaggttcagctggtgggtctggaagaggagagctcagagtttgtc
tgcaggaacacttttgaccatccttaccccaccaccaagatcatgtggatccctgacacc
aagggggtgtatccggatctgctggccacaagtggggactacctgcgcatttggagggtc
agcgacactgaaacacgtctcgaatgtttgctgaataacaacaagaactctgacttctgt
gctcccctcacatcctttgactggaatgaagttgatcctaatctgctaggcacgtccagc
attgacaccacctgcactatctggggactggagactggtcaggtattgggacgagtaaac
ctggtctctggacatgtgaagacgcagctcatcgctcatgacaaagaggtgtatgacatt
gcgttcagtcgtgcaggagggggcagagatatgtttgcctccgtgggagccgacggatcc
gtccgcatgtttgacctccggcacctggagcacagcaccatcatctacgaagacccccag
caccacccgctgctccggctctgctggaacaagcaggaccccaactacttggccactatg
gccatggacggcatggaggtggtcatcctggatgtgcgtgtgccgtgcactcccgtggct
cggctgaacaaccatcgagcttgtgtcaacggcatcgcctgggcccctcactcatcatgt
cacatctgcacggcagctgacgaccatcaggctctgatctgggacattcagcagatgccc
cgcgccatcgatgatcccatcctggcctacacggctgaaggggagatcaacaacgtgcag
tgggcgtgcacgcagccggactggatcgccatctgctacaacaactgcctggagatcctg
cgtgtgtaa

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