Pseudochaenichthys georgianus (South Georgia icefish): 117450948
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Entry
117450948 CDS
T09629
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04120
Ubiquitin mediated proteolysis
pgeo04137
Mitophagy - animal
pgeo04144
Endocytosis
pgeo04340
Hedgehog signaling pathway
pgeo04350
TGF-beta signaling pathway
pgeo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117450948 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117450948 (smurf1)
04350 TGF-beta signaling pathway
117450948 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117450948 (smurf1)
04137 Mitophagy - animal
117450948 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
117450948 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117450948 (smurf1)
04121 Ubiquitin system [BR:
pgeo04121
]
117450948 (smurf1)
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117450948 (smurf1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117450948 (smurf1)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117450948 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
117450948 (smurf1)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
HECT type E3
117450948 (smurf1)
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117450948 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
117450948
NCBI-ProteinID:
XP_033944876
LinkDB
All DBs
Position
8:30896792..30925155
Genome browser
AA seq
732 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPGQEGRLQTQRIRGTDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHTIISQQSQAKESSQAPQMEVGGEEGGVVGVVGGVGGGDGDVAARYERDLVHKLKLL
RHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAR
EWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHGHY
INGSFTLPFYKQLLGKPITLIDLETTDPELHKSLVWILENDITTVLDHTFCVEHNAFGKF
SQHELKPNGRNIPVTEDNKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDH
KELELIIGGLGKIDLADWKTNTRLKHCTCESNVVRWFWEAVEAFSEERRGRLLQFVTGST
RVPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDVPPYESYEKLYEKLL
TAVEETCGFAVE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcggaggaacgggtccagcatcaaaattcgactgacagtatta
tgtgccaagaacctcgcaaagaaagacttctttcgactaccggatcccttcgccaaggtt
gtggtggatggatcgggtcaatgccactcgacagacacggtcaagagcacactggacccc
aaatggaatcagcactacgacctctacattggaaaaacagactccatcacgatcagcata
tggaaccacaaaaagatccataaacggcagggggcgggcttcctgggctgcatacgactg
ctctctaacgccatcagcaggctaaaagacacaggataccagcgactagacctctgtaag
ctgaacccctcggacagtgacgcagtgcgggggcagatcgtagtgagcttacagacgcga
gatcgcatcggcagcggtggccctgtggtggactgcagggggctgctggaaaatgacggg
cctgtgtttgaaggatgcttcagtgaagagccgctgccctactcggaccccaccggggca
gcgggaggcgggaactgtcggctcgactcgcccggtcaggagggtcgtcttcagacgcag
cgaatcagagggacggactcgagaggccacggacacaccccccaaaacagaccgcacgga
caccagccgcccgacctgccggagggatacgaacaaagaacgacggtgcagggccaggtc
tacttccttcacacacagacgggcgtcagcacctggcacgaccctcgaataccgcgggat
ctggccagtgtgagctgtgaggagctgggcccgctgccggtgggctgggaggtccgcagc
accgtgtcggggcggatctactttgtggaccacaacaaccgaaccacacagttcacagac
ccgcgcctacacaccattatcagccagcaaagccaagccaaggagtcctcgcaagccccc
cagatggaggtggggggtgaggaggggggagttgtcggagtggtcgggggagttggaggc
ggagatggagacgtggcggcgcgatacgagagagacctggtgcataaattaaagctgctc
cgacacgagctgtccttacagcagcctcaggccggacactgtcgcatcgaggtgtccaga
gaggagatctttgaggagtcatatcggcaaataatgaagatgaggcccaaagacctgaag
aagcgcctgatggtgaagttcagaggagaggaggggctggactacggcggagtggccagg
gagtggctgtacctgctgtgtcatgaaatgttgaacccctattacggcctgttccagtac
tccacagacaatatctacacactacagatcaaccccgactcctccatcaaccctgaccac
ctgtcttatttccactttgttggccgggtgatgggcctggcagtttttcacggtcactac
atcaacggcagcttcacgctgcccttctacaaacagctgctaggaaaacccatcacgctc
atcgacctggagaccaccgaccccgagctgcacaagagtctcgtctggatactagagaac
gacatcactacggtcctcgaccacaccttctgcgtggagcacaacgccttcgggaagttc
tcacaacacgaactcaaacccaacggccgcaatatccccgttaccgaggacaacaaaaag
gaatacgtcaggctttatgtgaactggcggtttatgcgaggaatcgaagcccagtttctg
gctctacagaaggggttcagtgagctcatcccccagcacctcctcaaacctttcgaccac
aaagaactcgagttgatcatcggtgggctggggaagatcgacctggcggactggaagacc
aacacgcgtctgaagcactgcacctgtgagagcaacgtggtgcggtggttctgggaggcg
gtggaggccttcagcgaggagaggagaggacgcctcctgcagttcgtcacaggatccacc
cgagtcccgttacaggggttcaaggcgttgcagggttctacaggttctgcaggaccaagg
ctcttcaccatccacttgatagacgccaacacggacaacttgcccaaggctcacacctgt
tttaaccggatagacgtccctccctacgagtcctacgagaagctctatgagaaactgctg
acggctgtggaggagacctgcggcttcgctgtggagtga
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