Pseudochaenichthys georgianus (South Georgia icefish): 117450969
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Entry
117450969 CDS
T09629
Symbol
rhot1a
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117450969 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117450969 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pgeo04031
]
117450969 (rhot1a)
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
117450969 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
117450969 (rhot1a)
GTP-binding proteins [BR:
pgeo04031
]
Small (monomeric) G-proteins
Rho Family
Miro
117450969 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_7
EF-hand_1
Arf
RsgA_GTPase
MMR_HSR1
AAA
AAA_22
EF-hand_8
AAA_25
nSTAND1
Motif
Other DBs
NCBI-GeneID:
117450969
NCBI-ProteinID:
XP_033944913
LinkDB
All DBs
Position
8:complement(25554492..25572588)
Genome browser
AA seq
622 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDEVPLRAEEITIPADVTPERVPTHIVDYSE
AEQTEEQLFQEISKANVICIVYAVNNKKSIEKVTSHWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYQDIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
LKPSCIKSLTRIFKVSDLDNDGILNDNELNFFQRTCFNTPLAPQALEDVKNVVRRNMTDG
VNDDGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTQEYLFPMVKIPPDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPEEVKDLFKVFPYMPWGPDVNHTVGTNEQGWITYQ
GYLSQWTLTTYLDVQRSLEYLGYLGYSIIYEQDSQAAAITVTRNKRIDLQKKQTQRSVFR
CNVLGARGSGKSGFLQAFLGKNLQTQRRIREDHKSFYAISTTYVYGQEKYLLLHEVMPDF
DFLSEADLACDVVCLVYDVNNPGSFEYCAKVYKQYFIDSKTPCVMLAAKSDLHEVRQHYS
LSPHEFCRKHKLHPPQPFTCSTIEAPSKDIYTRLTTMAMYPSSQRPPPLYSLTKRSVTAL
CRLTHGLLAREVTCVGIRVENA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggacgtgaggatactgcttgtgggggaacccaaggtggggaagacatcgctg
atcatgtctctggtcagtgaggagtttcctgatgaggttcctcttcgagctgaggagatc
accatcccagctgatgtcaccccagagagggtgcccacacacattgtggactattcagag
gcagaacagacagaagagcagctgttccaagaaatatcaaaggccaatgttatctgcata
gtttacgcagtcaacaacaagaagtccatcgaaaaggtgacaagccactggatccctctc
ataaatgacagaacagacaaggatagcagagtaccactgatcctagtggggaacaagtcg
gacctggtggaacacagcagcatggagaccatcctgccaatcatgaatcaataccaggac
atcgagacatgtgtagagtgctcagctaaaaacctgaagaacatttccgagctgttctac
tacgcccagaaggctgtgctccacccgacgggacccctgtactgcccggaggagaaggag
ttgaagccttcctgcatcaagtctttaactagaatctttaaagtgtctgacctggacaac
gacggcatcctcaatgacaatgagctcaactttttccagagaacgtgtttcaatacaccg
ctggcgcctcaggctttagaggatgtgaagaatgtggtcaggagaaacatgacggatgga
gtcaacgacgacggacttacactcaaaggcttcctgttcctccacaccctcttcatccag
cgaggccgacacgagaccacctggacggtgctgaggaggtttggatatgacgacgacctg
gagctcacacaggaatacctgttccccatggtaaagatccccccggactgcaccacagag
ctcaatcacaacgcttacctcttcctccagagtgtcttcgacaaacatgacaaagacaga
gattgtgcgctgtcaccagaggaggtgaaggacttgttcaaagtgtttccctacatgccc
tggggcccggatgtcaaccacacggtgggcactaacgaacagggatggatcacataccag
ggatacctctcccagtggacgttgacaacatatctcgatgtacagcgtagtttggagtac
ttagggtaccttggctactctatcatctatgaacaggactctcaagctgctgccatcaca
gtaacacgtaacaagcgcatcgatctgcagaagaaacagactcagcgcagcgtcttccgg
tgcaacgtcttgggcgcccgaggcagcgggaagagcggcttcctgcaagcgttcctgggc
aagaacctgcagacacagaggcggattagagaagaccacaaatccttctacgccatcagc
acgacctacgtttatggtcaggaaaaatacctgctgctccatgaggtgatgccagacttt
gacttcctgtcagaggcggaccttgcttgtgatgtagtctgcttggtgtatgacgtcaac
aacccaggctcttttgaatactgcgccaaagtgtacaagcaatacttcatagatagcaag
acgccctgcgtgatgctcgccgccaagtctgacctgcacgaagtacggcagcactacagc
ctctcaccgcacgagttctgccgcaagcacaagctccaccccccccagccgttcacatgc
agcaccatcgaggcccccagcaaagacatctacaccagactcaccaccatggccatgtac
ccctccagccagcgccccccccctctgtacagtttgacaaagcgaagtgtgaccgcgctg
tgccggctaacacacgggctgctagccagggaggtgacgtgtgttggaatccgtgtggaa
aatgcatga
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