Pseudochaenichthys georgianus (South Georgia icefish): 117450970
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Entry
117450970 CDS
T09629
Symbol
coro1a
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117450970 (coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117450970 (coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117450970 (coro1a)
04147 Exosome [BR:
pgeo04147
]
117450970 (coro1a)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Phagocytosis
Coronins
117450970 (coro1a)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117450970 (coro1a)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117450970 (coro1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
WDCP
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
NBCH_WD40
WD_LRWD1
Beta-prop_SPT8
DUF7310
Seryl_tRNA_N
TSC22
Motif
Other DBs
NCBI-GeneID:
117450970
NCBI-ProteinID:
XP_033944917
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All DBs
Position
8:17511774..17519379
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AA seq
459 aa
AA seq
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MSRKVVRSSKFRHVFGQAVKNEQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFM
VLPLSKTGRIDMSYPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPDGGLTSPL
TNPVVKLEGHSKRVGILCWHPTAHNVLMSAGCDNVVILWNVARGESVVRIDSVHPDLIYN
ACWNQDGSQILTTCKDKTMRVLDPRKGTVLLEKEKTHEGSRPVRAVFLSDGKILTTGFSR
MSERQVALWDPKNFAEPLCLQELDTGSGVLLPFYDPDTGVVYLCGKGESSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGCMPKRGLEVNKCEITRFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTIGPEPSVEADEWFQGKDGQPILISLKDGFTATTKAKEFKVHKSLLKTTSASAGN
QPDNSGEVQSLRKEVKDLKAAIEELTTRMKELESWRESK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggaaggttgtgaggtccagtaagttccgtcacgtctttggccaggctgtgaaa
aatgaacaatgctacgatgacatccgaatctctcagatgacgtgggacagcaacttctgc
tccgtaaacccaaagtttgtggccatgattgtggatgccagtggcggaggagccttcatg
gtgttgcccctgagcaagacaggacgtatcgacatgtcctaccccactgtgtgcggacac
acagggccggtcctggacattgagttttgtcctcacaatgacaacatcattgccagtggc
tctgaggactgcagtgtcatgatttgggagatcccggatggcggcctgacctcgccactc
acaaatcctgttgtcaagctggagggtcactccaaacgtgttggcatcctgtgctggcac
cccaccgcccacaatgtgctgatgagtgcaggctgtgataacgtggtgatcctctggaac
gtggctcgtggggaatcagtggtgaggatcgacagcgttcaccctgacctcatctacaac
gcctgctggaaccaggacggctcccagatcctcaccacctgcaaagacaagaccatgcgg
gtgctggacccacgcaagggcaccgtgctcctcgagaaggagaagactcatgagggctct
aggcctgtcagggcggtgttcttgtccgatgggaagatcctcacgaccggattcagtcgc
atgagtgagagacaggtggcgctgtgggacccgaagaactttgcagagccactttgcctg
caggaactggacaccggtagtggcgtccttctgccgttttatgacccagacactggcgtc
gtctacctctgtggcaagggggagagcagtatccgttactttgaggtgacagatgaagcc
ccttatgtccattacctgtccatgtacagcagcaaggagagccagaaggggatgggctgc
atgcccaagaggggcctggaagtcaacaaatgtgaaattaccaggttctacaaactccac
gagaggaagtgtgagcccattgtcatgaccgtgccacgcaagtccgatctgttccaggag
gatctgtacccggacaccatcggtcctgagccttcagtggaagctgatgagtggtttcag
ggaaaagatggtcagcccatcctgatctctctaaaggatggctttacagcaaccaccaaa
gctaaggagttcaaagttcacaagagtctcctgaagaccacgtctgcttctgctgggaat
caaccagataacagcggggaggttcagtccttgaggaaggaagtgaaagacctgaaagca
gcaatagaggagctgaccacccgtatgaaggagctggagagctggagagaatcaaagtag
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