Pseudochaenichthys georgianus (South Georgia icefish): 117450978
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Entry
117450978 CDS
T09629
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04136
Autophagy - other
pgeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117450978 (wipi1)
04136 Autophagy - other
117450978 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117450978 (wipi1)
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117450978 (wipi1)
Membrane trafficking [BR:
pgeo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117450978 (wipi1)
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117450978 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_RSE1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
Beta-prop_HPS5
Beta-prop_IFT140_1st
BCAS3_WD40
Beta-prop_WDR19_2nd
CNH
Beta-prop_Vps41
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
117450978
NCBI-ProteinID:
XP_033944933
LinkDB
All DBs
Position
8:complement(87199..118497)
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AA seq
469 aa
AA seq
DB search
MESGVAGPGGEAAGPGGEAAGPGGGDGPGLQFGCASFNQDSTSLAVGTKTGYKLFSLTKV
DRLDCLHESAETPDVYIVERLFSSSLVVVVSTAMPQRMNIYHFKKETEICNYSYPNTIRA
VKLNRQRLAVCLEESIYIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSYLAYPGSATT
GEIIVYDSNNLNTVAMIPAHDSPLAALSFNASATKLASASEKGTVIRVFSIPEGLRLFEF
RRGMKRYVNISSLSFSPDGQFLCASSNTETVHIFKMDQLGPSGGDEAATWTAYVGKMFSA
ASSYLPAQVSGMMSQDRAFAVVHLLTSVQRNVCTMAMIQKLPRLLVSTADGQLFIYNVDP
LDGGECMLAHKHRLFGIDDNVDEGEESEGSEVTGPAQACPSYAATAALPVSGPTTATLTG
YSEDGGAKKGEVIPEHEFAAGPVCLDDENEFPPINWCRDGTGGGPARRS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggagagcggagtggcgggccccggcggagaggcagcggggcccggcggagaggcagcg
gggcccggcggaggggacggaccggggctgcagttcggctgcgcctcctttaaccaggac
tccacgtcactggctgtgggaacaaagactggctacaagctgttctctttgaccaaggtg
gatagactggactgtctccatgagagtgcagagactccagatgtgtacatcgtggagcgt
ctgttctccagcagtctggtggttgtagtgagcaccgccatgccgcagcgcatgaacatc
taccacttcaagaaggagacggagatctgcaattacagctaccccaacaccatccgggct
gtcaagctcaacagacagaggctggcggtgtgccttgaagagtccatttatatccacaac
atcaaagacatgaagctgctcaagactctgctcaacactccgtccaacccctcaggtctc
tgtgctctctctatcaaccattccaactcctacctggcgtaccccggcagcgccaccacc
ggggagatcatagtgtatgattccaacaacttgaacacagtggccatgatcccggcccac
gacagtcctctggcagctctcagctttaacgcctcggccaccaagctagccagcgcctcg
gagaagggaaccgtcatccgagtgttctccattcctgagggcctgcgtctgtttgagttc
cgccggggcatgaagaggtacgtcaatataagctccttatccttcagtcctgacggccag
ttcctctgcgcctccagcaacacagagacggtgcacatcttcaagatggatcaactggga
ccaagtggaggggacgaggcggccacctggacagcctacgtggggaagatgttctcagca
gccagcagctacctcccggcccaggtctcgggtatgatgagccaggaccgggcctttgcc
gtcgtccacctgctgacatccgtccagaggaacgtctgcaccatggctatgatccagaag
cttccacggctcctggtgtccaccgctgacggtcagctctttatttacaacgtggatccg
ctggacggaggcgagtgtatgttagcccacaaacacaggctttttggtatagatgataac
gtggacgaaggagaagagtcagaggggtcagaggtcacagggccagcacaggcgtgtcca
tcctacgctgcgaccgctgccttaccagtctctggtcccaccactgctaccctcactggc
tactctgaagatggcggggcaaagaaaggcgaagtcattccagaacacgagtttgctgct
ggacctgtgtgtctggacgacgagaacgagtttcctcccattaattggtgccgagacggg
actggaggcggcccggccaggcgctcctga
DBGET
integrated database retrieval system
