Pseudochaenichthys georgianus (South Georgia icefish): 117450985
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Entry
117450985 CDS
T09629
Symbol
myom2a
Name
(RefSeq) myomesin-2 isoform X1
KO
K24495
myomesin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117450985 (myom2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117450985 (myom2a)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117450985 (myom2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
ig
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
C2-set_2
C1-set
TBD
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
117450985
NCBI-ProteinID:
XP_033944946
LinkDB
All DBs
Position
1:complement(45589477..45663173)
Genome browser
AA seq
1531 aa
AA seq
DB search
MASKVTSWFKKKGKAVSQVNTDYAYHHSSCVCAKQQTAVRQSSCISESQATAAMAEQGYT
IPAFRQRSAEDGTEEYQRVSTNVEKGLTVIQEELHRMRMATKAQVESLNLQREVKEMMYK
KVITSETQKMPDFLVALRPHTVWEKTPVKLFCTVEGNPRPVVKWYKGGAPVDPLSAPGKY
KIENKYGVHSLIISRCAVSDTAEYSAVASNPHGTATSKASVTVKRAAGTGESCQLNLVPH
LTEIHASKLEVSLLDRFSVSFGTEGSCISLVCSMVVVPDLPNVPPLVQWYRDDKLLKPSA
LAEMSVGGGSARLTLPQLAKDDEGLYTLRIFTKDGTAEHSAYLFVSDAAAPVSGAPGAPM
SVKAYDINSDYVLVAWKAPNTVNEAAISGYFVDRRESGSDAWVQCNDAPVKICKYPVHGL
KVGNSYHFRVRAVNSSGVSRPSRKSDKVTALDAAESERLQVIKIEGRYDILIHDDDLEGY
VTIPGQPTEVHASEVFKSYIVLSWTPPRPRGRVPLSYVIEKCIAGTGAWQRINTAVKLHS
PRYPVFDLQDGQKYQFRVFSVNLYGCSEPSFSSEPVQRQDEDGVEVRVGVPSAPGQVVAT
RNSKSSVFVQWESPKHLKNLVGYYIDGRIVGSKEWFPCNHKPFKHCRFVVHALIPGESYT
FRVQAVNVFGLSEESQESTVIAVEPALGKGVDYATPSSASGISMLSCDGSSMTLVWKSPK
HCGGSKVNAYYIDKRNADTLVWKEVNVAAVKERICTVDGLTEGVFYEFKVQAGNMAGVGV
PSAPSSPMKCEAWTMEQPGPAYDMSFSEVRGQSLVVLWKAPVYIGASAVSGYLVEMAKKG
SSEFVTLNEEAVCHRYLQVSGLQEGETYVFRVRSVNANGVGKPSQLSEPICAKALPGTQE
IVASVDEETGDVFLSLEACEISETSKFVWSKNYKAIGDCPRVAISNKGRTSRLTFSNPDK
DDLGRYSAVVTDTDGVSSSHTLTEDALNTMLELSCAIRHPIVPLKHGLDYEILEKGQVRF
SLQAVKLSPSVSYRVIVNDKEVTSGEGIKISHDVATGMIQMTVDHFTRASEGTYVVQIHD
GKAKNQSSLVLVGDVFKAALKEAEFQRKEHIRKQGPHFSEYLSFSVTEDCTVLLACKVAN
VKKETTFHWYKEDDEIVPETPPNVLSGACAIAIPLFSRKDQGVYKAVLGDDRGKDSSSFD
ISGQVFDDIINALAQNAGASASELVLQCTPEGIRLQCYMNYYTEEMKTSWKHKESKIASS
EKMRIGGTAEMAWMQIYDPSDKEKGKYSIEISDGVQTHSRTFDLSGQAYTDAYEEYLRLK
SAAFAEKNRGRVVGGLPDVVTIMEEKSLSLTCTVWGEPAPEVSWFKNEQEVASNEHTRVT
FEGGKFASMVINRVTPDDSGKYSINVRNKYGGEFVEITVSVYRLGEKIPEPKLGQPKTTA
ATPAPPPAAPSKTPTPTPKSQTPVSMKSPTPASTPASTPVPKSPTPSRGVKSPTPANTPA
STPIPKSPTPSRGVKSPTPPRSMKSPTPPRK
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaagtcacgtcttggtttaagaagaaggggaaggctgtgagccaagtgaac
actgactatgcgtatcaccactcctcgtgtgtgtgcgccaagcagcagacagcagtgagg
caatccagctgtatctcggagagccaggccaccgcggctatggcagaacaaggctacacc
atccctgcgtttaggcagaggagtgcagaagatggaacggaggagtaccagagagtgagc
acgaatgttgagaaaggactgacggtgatccaggaggagctccacaggatgaggatggcc
accaaggcccaggtggagagtctgaacctgcagagagaggttaaggaaatgatgtacaag
aaggtgattacgtcagaaacccagaagatgccggacttcctggtggctcttcgacctcac
accgtgtgggagaagacccccgtcaaactgttctgtaccgtggagggaaaccccaggccc
gtcgtcaaatggtataaaggaggagcgcccgtcgacccgctgagcgccccaggaaagtac
aagattgaaaacaagtatggagtccacagtttgatcatcagcaggtgtgcagtgagcgat
acggctgagtacagcgcggtggcatcaaaccctcacggcaccgccaccagcaaggcttcc
gtcaccgtgaagagagcagccgggaccggggagtcctgccagctcaatttggtgccccac
ctgactgagatccatgccagcaagctggaggtcagtcttttggaccgtttctccgtcagc
tttgggacggagggcagctgcatcagcctggtctgctccatggtggtggtcccagacctg
cccaacgtgcccccccttgtccagtggtaccgagacgataagcttctgaagcccagcgct
ctggcggagatgtctgtgggggggggatccgcccgcctgacgctgcctcagctggccaaa
gacgacgagggtctctacacgctgcgcatcttcaccaaggacggcacggcggagcacagc
gcctacctgttcgtctcagatgcggcggcccctgtctctggcgcccctggtgccccgatg
agtgtgaaggcgtacgacatcaactctgactacgtgctggtggcctggaaagccccgaac
accgtcaacgaggcggccatcagcggatacttcgtggacaggcgtgagtctggcagcgac
gcctgggtccagtgcaacgacgccccggtgaagatctgtaaatacccggtccacggcctg
aaggtggggaactcgtaccacttcagggtccgagccgtgaacagctctggggtcagcagg
ccgtccagaaagtcggacaaagtgaccgccctcgatgccgccgagagcgagaggctgcaa
gtgattaaaatcgaagggagatacgacattctgatccatgacgatgatctggaaggctac
gtaacgatcccaggtcagcctaccgaagtccacgcgtccgaggttttcaaatcgtacatc
gtgctgagctggacgccgcctcgcccccgcggacgagtgccgctgagctacgtcatcgaa
aagtgcatagcgggcactggagcatggcagcggatcaacacggcggtcaaactgcactct
ccacgttacccggtttttgatttgcaagacggacaaaagtaccagttcagagtgttttcg
gtgaacctgtacggctgcagcgagccgtcgttttcctccgagcccgtccagaggcaggac
gaggacggtgttgaggtgcgggttggcgtgccctcggcccccggtcaggtcgtggccacc
aggaactccaagtcctccgtgttcgttcagtgggagtctcccaagcacctgaagaacctg
gtgggatactacatcgacggacgcatcgtgggatccaaggagtggttcccctgcaaccac
aagcccttcaaacactgcaggtttgtggtccacgccctgatccctggtgagagctacacc
ttcagagtccaggcggtgaacgtgttcggcctcagtgaagaatcccaggagtccacggtc
atcgctgtggagccggcactcggcaaaggcgtggattatgcgacccccagctccgcctct
ggcatcagcatgctgagctgcgacggctcctccatgactttggtctggaagagccccaaa
cactgcggaggctccaaggtcaacgcctactacatcgacaagaggaacgctgacacgctg
gtgtggaaggaggtcaacgtggcggctgtgaaggagaggatctgcaccgtggacggtctg
actgaaggagtcttctacgagtttaaggttcaggctggcaacatggcgggcgtcggggtg
ccgtcggctcccagcagccccatgaagtgtgaagcctggaccatggagcagccaggcccg
gcgtacgacatgagcttcagtgaggtcagaggtcagtccctggtcgtcctgtggaaagct
ccggtgtacatcggggccagcgctgtgtctgggtatctggtggagatggccaagaaggga
tcctcagagtttgtgactctgaacgaggaagctgtgtgccaccggtacctgcaggtgagc
ggtctgcaggaaggagaaacctacgtgttcagagttcgctcggtgaacgctaacggagtc
ggaaaaccttcccagctttctgagcccatctgtgccaaagctctgccaggcactcaggag
atcgtggccagcgtggacgaggagaccggagacgtgttcctgtctctggaggcctgcgag
atctcagagacctccaagttcgtctggtccaagaactacaaagccatcggagactgtccc
agagtcgccatctccaacaagggcagaacctccagactgaccttctccaacccggacaaa
gacgatctgggcagatactctgcggtcgtcaccgacacagacggagtgtcctccagccac
accctgactgaggacgctctgaacaccatgctggagctcagctgcgccatcagacatcca
atcgttcctctgaaacacggtctggattacgagatcttggagaagggtcaagtgcgtttc
tcgctgcaggccgtcaaactgtcgccctccgtgtcctacagagtcatcgttaacgacaag
gaggtcacatctggagagggaattaagatcagtcacgacgtcgccacggggatgatccag
atgacggtggatcatttcactcgagccagcgagggaacgtacgtcgttcagatccacgac
ggaaaggccaagaaccagagctccctggtgctggtgggagacgtgttcaaagctgctctg
aaggaggccgagtttcagaggaaggagcacatcaggaagcaaggtcctcacttctctgag
tatctgtccttcagcgtcactgaggactgcactgttctgctcgcctgcaaggtggctaat
gtgaagaaggagacgactttccactggtacaaagaggacgatgagattgttccagaaact
cctcccaatgtcctgtctggagcctgcgctatcgccatccctctgttctccaggaaggat
cagggcgtgtacaaggcggtgctcggtgacgacagaggaaaggattcatcctccttcgac
atctcagggcaagtgtttgacgacatcatcaacgccctcgcccagaatgcaggtgcctct
gcctctgagctggtgcttcagtgcacaccagagggcatcaggctgcagtgctacatgaac
tactacacagaggagatgaagacctcctggaaacacaaggagagtaagatcgcctcctct
gagaagatgaggatcggaggaacagcggagatggcgtggatgcagatctatgatccgtcc
gataaggagaaggggaaatactccatcgagatctccgacggcgtgcagacccactccagg
accttcgacctctccggacaggcatacaccgatgcctatgaggagtacctgagactcaag
tccgccgcatttgctgagaagaaccgtggcagagtggtgggtggtctgcctgatgttgtc
accattatggaagagaagtctctgagcctgacctgcaccgtgtggggcgagccggccccc
gaggtctcctggttcaagaacgagcaggaagtggcctccaacgagcacaccagggtcacc
ttcgagggcggcaagttcgccagcatggtcatcaacagggtgacgcccgacgactccggc
aagtacagcatcaacgtgaggaacaagtacggcggggagttcgtggagatcaccgtcagc
gtgtaccggctgggagagaagatccccgagcccaagctggggcaacccaaaaccaccgct
gctacccccgctcctccccccgctgctccctccaaaaccccaacgccgacccctaaatcc
cagaccccggtctccatgaagagcccgactcccgcctctactcctgcttctactcccgtc
cctaaatctccgactccgtctcgcggcgtgaaaagtccgactccggccaacactcccgct
tctacccccatcccaaaatctccaactccgtctcgcggcgtgaagtctccaactccaccc
agatccatgaagtctcccacccctcccaggaagtaa
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