Pseudochaenichthys georgianus (South Georgia icefish): 117451002
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Entry
117451002 CDS
T09629
Symbol
hgs
Name
(RefSeq) LOW QUALITY PROTEIN: hepatocyte growth factor-regulated tyrosine kinase substrate
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03250
Viral life cycle - HIV-1
pgeo04144
Endocytosis
pgeo04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117451002 (hgs)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117451002 (hgs)
04145 Phagocytosis
117451002 (hgs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117451002 (hgs)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
117451002 (hgs)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
Adaptin_N
FYVE_2
UIM_2
HEAT_Maestro
Cnd1
Malate_DH
zf-4CXXC_R1
UIM
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
117451002
NCBI-ProteinID:
XP_033944962
LinkDB
All DBs
Position
8:complement(20206033..20216538)
Genome browser
AA seq
775 aa
AA seq
DB search
MGKGGGTFERLLDKATSQLLLETDWESILQICDLIRQGDAQAKYAVGAIKKKLSDKNPHV
ALYALEVLESVVKNCGQTVHDEVASKTTMEELKDLLKTQTEPNVRNKILYLIQAWSHAFR
NEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKH
HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCFELLNNHPSLSPPLRKAEGKAPTPS
AVELPPEYLTSPLSQQSQMPPKRDEAALQEEEELQMAIALSQSEADEKERMRHKSSYSMY
PKADPTPVTSSAPPVSTLYTSPVNSSAPSAEDVDPELARYLNRTYWEKKQEEARKSPTPS
APAPVPLAEPAPPISQPVETHVPVQPVSIVEQPYQNGESEENHEQFLKALQNSVTTFLNR
MKSNHMRGRSITNDSAVLSLFQSINNMHPQLLDILNQLDEKRLYYEGLQDKLAQVRDARA
ALNSLRDEHREKLRRAAEESERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIQRLQDQEKE
RQMRLEQQKHTIQMRAQMPAFSLPYAQMQSLPPNVAGGVVYQPGAPPSYPGTFSPAGSVE
GSPMHNIYMNQSGQNAPPQYQAMPNVAPDPNMVNAYMYQAAGTNGQPAPPPGQAPPTTSP
PYSNYQPTPTQGYPNVVSQAQSLPPMSQPAPTNGMGYMGYQPYPMQNMISALPGQDPNMP
PQQYMQGQPPMYQQVAPPGGQQQQQQQQHQQQQQQQQHVPQAVPGSAEAQLISFD
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaggtggaggtacctttgaacggcttcttgataaagccaccagtcagctgctg
ctggagactgactgggaatccatcctgcagatttgtgatctcatccgacaaggagatgca
caagcaaaatatgctgttggggccatcaagaagaagcttagcgacaaaaatccacatgtg
gctctctacgcacttgaggtcctggagtcagtggtgaagaactgtggccagacagtccac
gatgaggtggcgagtaaaacaactatggaggagctcaaggatttactgaagacacagacg
gagccaaatgtcagaaacaaaatcctgtacctgatccaggcctggtctcacgccttccgc
aacgaacccaaatacaaggtggtccaagacacctatcagatcatgaaagtggaaggtcat
gtgttccctgagtttaaggagagtgatgcgatgtttgcagcagagagagccccggactgg
gttgatgccgaggagtgccaccggtgcagagtccagtttggagtcatgacaagaaagcac
cattgtcgagcctgtggccagatcttctgtggcaagtgttcgtctaagtactccaccatt
cccaagttcggcatagagaaggaagtgcgtgtgtgtgagccttgctttgagctgcttaac
aaccacccctccctctctcctcctctcaggaaagctgaggggaaagcccccaccccaagt
gcagtcgagctgcctcctgagtacctgaccagcccgctgtcccaacagtcccagatgccc
ccgaagagagacgaggccgctctgcaggaggaggaggagctgcagatggccatcgccctc
tcccaaagtgaggcggacgagaaggagcgcatgaggcataagagctcctactcaatgtat
cccaaagctgatcccactccagtgacttcctcagcaccgcctgtcagcaccctctacacc
tcccctgtgaactcctctgctccatcagctgaagatgttgaccctgagctggcccgctac
ctgaacagaacctactgggagaagaaacaagaagaggctcgcaagagtcccaccccctca
gccccggcccccgtgcctctggctgagcctgctccacccatcagtcagccagtagaaact
catgtccctgtgcagccagtcagcatagtggagcagccctaccagaacggggagtcggag
gagaaccatgagcagtttctgaaggctctgcagaactctgtcaccaccttccttaaccgc
atgaagagcaaccacatgcgtgggcgcagcatcaccaacgacagcgctgtgctctcactc
ttccagtccatcaacaacatgcatcctcagctgttggacatcctcaaccagctggatgag
aagcgattgtattacgaggggctgcaggacaagttggctcaggtgcgagatgctcgggct
gccctcaactcactgcgggacgaacacagagagaagctgcgccgtgccgccgaggagtca
gagagacagaggcagatccagctggctcagaaactggagatcatgaggcagaagaaacag
gagtacctggaaatgcagagacagctggccattcagcgcctccaggaccaggagaaggag
aggcagatgcgtctggagcagcagaaacacacaatccagatgagagcacaaatgcctgct
ttctctctgccatacgcccagatgcagtctttgccccccaatgtggcgggaggggtggtg
taccagcctggtgctccacccagctacccgggcaccttcagccctgctggttctgtggag
ggttcaccaatgcacaacatctatatgaaccaatcagggcagaatgcacctccacagtac
caggccatgcccaatgttgccccagatccaaatatggttaatgcatacatgtaccaggct
gcaggcaccaacgggcagcctgctcctcctcccggtcaagctccgcccactacaagtcca
ccttactccaactatcagcccacacccacacagggctacccgaatgtggtctcgcaggca
cagagtttgccccccatgtcgcagcctgctcccactaacggtatgggctacatgggctac
cagccttaccccatgcagaacatgatttcagcattgccaggacaggaccccaacatgccc
ccccaacagtacatgcaaggacagccgcccatgtaccaacaggtggccccccctggaggc
cagcagcagcagcagcagcaacaacatcagcagcagcagcaacagcagcagcatgttcct
caggctgtgcccggcagtgcagaggctcagctcatctccttcgactaa
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