Pseudochaenichthys georgianus (South Georgia icefish): 117451014
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Entry
117451014 CDS
T09629
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117451014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117451014
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117451014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
LRR_8
SDA1_dom
BUD22
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
117451014
NCBI-ProteinID:
XP_033944977
LinkDB
All DBs
Position
8:complement(31463439..31475856)
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AA seq
577 aa
AA seq
DB search
MATDIVAQLAESLAKTGVEDGELSYKGQGRKLDDAQSVEEIVKEIQDFEDLQALRLEGNT
IGVAAAQAIAKALETKSKFKRCYWSDMFTGRLRSEIPPALNSLGDALMLANARLTVLDLS
DNAFGPDGVKGIERLLKSTACYTLQELRLNNCGMGIGGGKILAAALIQCYKTSSAEGTPL
GLKAFVAGRNRLENEGATALAQAFKLMGSLEEINVPQNGINHPGVTAMAGAVQNNPNLRI
LNLNDNTFTEKGAIAMAQALKHLRSIQVINFGDCLVRPAGAIAIAETVSEGLPILKELNL
SFGEITEEAALAVVHAVKNKDQLEKLDLNGNCLGEDGCKVLKDAMEAMNLADILGSLSDD
DGEPEDDDEEDDDEEEEDEDDEDVDDEEIEEEEEEEEEDDDSNGIKLSTPASAPRPPDVS
SFLSFPSPDKLLKLGAKRALLIEQQVDVSDASKTAEAFLKIASVYKEENNDVKIAVLDSI
DALLKKAFATPSFQGYSFVSSLLVLLGLLKSEDKVKPVVVVPGHLHTLEHVVRQDYFPKE
NVAVLEAFLSRNNNALESCGNARDDLQSTLQRVRSEG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagacattgttgcgcagttggccgaatctctggctaaaactggagtagaagat
ggagagctgagctacaaaggccagggaagaaagctggacgatgcccaatcggtggaggag
atcgtcaaggagatccaggactttgaggacctacaggctctgaggttggagggaaacact
atcggtgtagcggcagctcaggccatcgccaaggccctcgagacaaagagcaagttcaag
cgctgttattggagtgacatgttcacaggtcgcctgcgctctgagatccccccggccctg
aattctctgggtgacgctctgatgctggcgaacgcccggctcacagttttagacctcagt
gacaacgccttcggccccgacggggtgaagggcatcgagaggctgctgaagagcaccgcc
tgctacaccctgcaggagctgcggctcaacaactgtggcatgggcatcggagggggaaag
atcttggctgccgcgttgatccagtgctataagacctccagtgcagagggcacccccctc
ggcctgaaggccttcgtggcagggaggaaccgcctggagaacgaaggggccaccgctctc
gctcaagccttcaagctgatgggcagcctggaggagatcaacgtgccgcagaacggtatc
aatcacccgggcgtcacggcgatggctggagccgtgcagaacaaccccaacctgcgcatc
ctcaacctcaacgacaacaccttcactgagaagggggccatcgccatggcacaggctctg
aaacatctccgcagcatccaggtgataaactttggagactgtctggtgcggccggcagga
gccatcgccatcgcagaaactgtatcagagggactacccatactaaaggaactcaacctg
tcgtttggtgagatcacagaggaagccgctctggccgtggtgcacgccgtgaagaacaag
gaccagctggagaaactggacctcaacggtaattgtctcggagaggacggctgcaaagtt
ctgaaagacgccatggaggccatgaacctcgccgatatcctcggatcgctcagtgacgat
gacggtgagccggaggatgatgacgaagaagatgatgatgaggaagaagaagacgaagat
gacgaggatgtggatgatgaggaaatagaggaagaagaggaggaagaagaggaggacgat
gatagcaatggcatcaagttgtccacccctgcctcagccccccggcctccagacgtctcc
tccttcctcagcttcccgtctccagacaaactgctcaaactgggagccaagagagcgctg
ctgatcgagcagcaggtggacgtttccgatgcttcaaaaacagctgaagctttcctaaag
atcgcatctgtgtataaggaggagaataatgacgttaagattgccgtgttggacagcatc
gatgcccttctgaagaaagcttttgccactccgtccttccaaggctacagcttcgtatcg
tctctgttggtgctgctcggacttctcaagagtgaggacaaggtgaagccggtggtcgtg
gttcctggtcacctccacactttagagcacgtggttcggcaggactacttccccaaggag
aacgtggcggtgctggaggccttcttgtcccgaaacaacaatgctctggagtcatgcgga
aacgccagagacgacctccagtcaacactgcagagagtcaggtctgagggctga
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