Pseudochaenichthys georgianus (South Georgia icefish): 117451057
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Entry
117451057 CDS
T09629
Symbol
arhgap23a
Name
(RefSeq) rho GTPase-activating protein 23 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117451057 (arhgap23a)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Golgi transport
Others
Others
117451057 (arhgap23a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117451057 (arhgap23a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PH_9
PDZ_6
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117451057
NCBI-ProteinID:
XP_033945034
LinkDB
All DBs
Position
8:15509209..15623360
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AA seq
1832 aa
AA seq
DB search
MWAGRDADLRKRRASMPASTLPCTVPAASDWSFQNPVGVDCSSPEPRCIWLAVLRRATGS
GAPPAMPTGPIQSSHQPRGKGRRDGLSAGDNPRPPMVTRPGREGVGVGWKGPRTLVLHKN
SQGFGFTLRHFIVYPPESALHTNLKDEENGNGKGYQKDRLEPMDTIFVKSVREKGPAHLA
GLCTGDRLVKVNGESVLGKTYSQVIALIQNSESVLELSIMPKDEDVLQLVSAYSQDAYLT
GNEPYSGGAEYLPPPPPLCYPHTKATPPAGSPQSGSMGQNQLDNWSRWPGSSSPSSPLDN
RSAVGSPASWQEGRAGEPGGVGHSSPAHRTEEIQYGMTSQQPQGQTRGRSYSSSSSSGGP
LSSPLQVHYPNHHAASSSQAPPRKSSSAWTSPPLPQVSHGRTEHRQQALSDWYYNQVPER
PGRSMQTRHRSYSQDRLSDSRRQQQRTGGWPHSASQDTLMLLQQSGPGPHGEPYWSYADW
EGGPGPGHPTTNYTRTRSENLLAQYDHHGHSLEMLDRAAPALVSPRFERPSWVQQAPPPP
PRTDAYTRQGNHYGAAQAPPMPWQSHSKHHPQTHPQAHSQAHSQPQPQPQQPPPQSRRLP
SGQSMDDQPVGYRSYSPSFYRKTGRIMQQAHSFRDPSYSGPHMNWNPTPKTSPPEDTTAP
LTSSAASPLASATPESQGRTYMPTNHERERGSVEAEVAQTQEVVLRQKPPTGRRNAHGMR
HPHYALPIDGLEPSLFSPDAQDPATSSTGDVAPRKPNGNLAPLPIEDDSLASIPYIDEPT
SPGADLRARHVPASSVVSSGMNSAPAVVTSPASPTFTFPLTRLFSHDCSSIKSGRRSSYL
LAITTERSKSCDEGLNTFREEGRVFSRLPKRVKSFFTDGSLDNLGTAEEVRSKRHSTSEL
GNIIYSDVRQEGWLHFKQILTEKGKKVGSGMRPWKRVFSVLRSHSLFLYKDKREAVLRGA
TIGGAAEDEQPISIRGCLVDIAYSETKRKHALRLTTQDFCEYLLQAEDREDMLEWIKVIR
ENSKTDNEELGFSRQALINKKLNDYRKQSPTGSKPDSSPRMHRMKPPFMHSKAENAAGAP
RSPKPEGKDESGPPKSPWSINIMKKTKKSGPKAFGVRLEDCQPGVNNKFIPLIVEICCGL
VEEMGLEYTGIYRVPGNNAMVSSLQDQLNKGVEINPAEEKWQDLNVVSSLLKSFFRKLPE
PLFTNDKYNDFIDANRIDSASERLKTMNKLIRDLPDYYYDTLKFLVVHLKTVADSSDKNK
MEPRNLALVFGPTLVRTSEDNMKDMVTHMPDRYKIVETLIQHCNWFFAEEQDEDEKTPVD
TQDVQPAPNIDHLLSNIGRTCLLGEASDSTNSDSAKSKGSWGSKKDITSKDFLALSIMSA
VTGRKRRKRHNARRVGSSTDDDSEHEPIKAGHLVAGGEEGAGLPEGDTAPRAEGEEDDDE
EEEEEDQEVVESGVKEVVGEQVVTVDPGRTCSKEEEEAGGRPAATLLLEEEEVRVEVKGP
PWRAPEDARSIVSGYSTLSTLGRSLGSEGRGGDADDEHSELVSETDNESGFASRSLTQER
PEKHPTPPVNTQAAPRSFLYTHYKAPALSPTNLLAPPTALTHTPDSADRSEGEARSTTPS
SSSFSSSSTTHRLHSRPSFNSHKLIQCDTLARKKLKSEKGKARSLDLLELQAAVAEAHAA
GSGSDGTSRARRETSRTNPSSGSSQESLHPARLKPSLPPSEASSFTPTGPGGRSLADQVR
ARLLGSADDLRSVGLRKPLSPETRRKRRAWRRHTVVASPTEISEKRPPLTVSDFPLSPIT
QNQMKTLPRDAEGLEQEPATRQAPTSRFHQYL
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggggagggatgcggatctgagaaaacgccgcgcctcgatgcccgcttctacg
ctcccttgcactgtgccggccgcgtccgactggagcttccagaacccggtgggggtggac
tgcagctcgcctgaaccccgctgcatctggctggccgtgctccgcagggctacgggctca
ggggcgccgcccgccatgcccactgggcccatccagagctctcatcagccccggggtaag
ggacggagggatggtctctcagccggtgacaaccctcgaccgccgatggttacccggccg
ggaagggagggggtcggcgtgggctggaagggtccccggacgctggtcctccataagaac
tcacagggtttcggcttcacgctacgccacttcatcgtgtaccctccagagtccgccctg
cacaccaacctcaaggatgaagagaacggtaacggaaaggggtaccagaaagatcgcctg
gagccgatggacaccatatttgtgaagagtgtgagagaaaaaggaccggcccacctggcg
ggcttgtgcacaggggaccggctggtgaaagtgaacggagagagtgttctgggaaagacg
tactcgcaggtcatcgccctcattcagaacagcgaaagtgtgttggagctctccattatg
ccaaaagacgaagatgtgcttcagttggtaagtgcttactcccaggatgcctacctgaca
ggcaacgaaccctactcagggggagctgagtacctcccaccaccaccccccctctgttac
ccacacaccaaggccacgccccctgctggaagtcctcagtctggctctatgggccagaac
cagctggataactggagtcgctggccaggatcttcaagcccctcttcccccctggacaac
cgctccgctgtgggcagccccgccagctggcaggaagggcgcgcaggtgagcccggcggc
gtggggcacagcagcccggcccaccgcacagaggagatccagtacggtatgaccagccag
cagcctcagggccagaccaggggacgctcctactcttcctcttcctcatcaggaggccct
ttgtccagcccgctgcaggtccactacccgaaccaccacgctgctagctcctctcaggca
ccgccacgcaagtccagctcagcctggacgagcccccccctgccccaggtcagccatggc
cgcacggagcaccggcagcaggcgctctctgactggtactacaaccaggtgcctgagcgc
ccgggacgcagcatgcagacccggcaccgcagctactctcaggaccggctcagcgactcc
cggaggcagcagcagcggacgggcggctggccccacagcgcctctcaggacactctgatg
ttactgcagcagtcaggacccgggccccatggggagccctactggtcctatgcagactgg
gaggggggcccaggtcccggccaccctaccactaactatacccgaacccgctctgaaaac
ctgctggcccagtacgatcaccatggccactcgttagagatgctggaccgagcagcacct
gcactggtctcgcctcggtttgagaggccgtcctgggttcagcaggctcccccgccgccc
cccaggactgacgcctacacaaggcaggggaatcattacggtgcagctcaagctcctcca
atgccctggcagtcacattctaaacaccacccccagactcacccccaggctcacagccag
gcccactcccagccccagcctcagccccagcagcctcctcctcagagcagacggctcccc
tctgggcagagcatggacgaccagccggtgggctaccgcagctacagcccctctttttac
cggaagacaggtcgcatcatgcagcaagcccactctttcagggacccttcgtactctggc
cctcacatgaactggaacccaacgccaaaaacgagccccccagaggacaccacagcacct
ctcacttcttctgctgcgtctccacttgcctctgccactcccgaatcccagggccgaacg
tacatgccgacaaaccacgagagggaacgagggtccgtggaggcagaggtggcacagacc
caggaagtggtgctgaggcagaaacctcctactgggcggaggaacgcccatggcatgcgt
caccctcactacgccctgcccatagacgggctagaaccctctttgttttctcccgatgcc
caggaccctgccactagttccacgggagatgtagcccctcggaaaccaaatggcaacctt
gccccactccctatagaggacgactccctggcctccatcccctacatagatgagccgacg
agccccggcgcagatttacgcgcccgtcacgtgccagcgtcctcggtggtgtccagcggc
atgaattctgcgcccgccgtggttaccagccccgcctcccccaccttcacctttcccctc
actaggctcttctcacatgactgcagcagtattaaatccggtcgccgttcctcctatctt
ctagccatcaccacggagcgctccaagtcatgtgacgaaggactcaacacgttcagagag
gaaggccgagtcttctcgaggctaccaaagagagtgaagagcttcttcaccgacgggtct
ctggacaaccttgggacagctgaggaggttcgatctaaacgccactccacctcagagcta
ggaaacatcatttacagcgacgtccgacaagaaggatggctgcacttcaaacaaatcctc
acagagaagggcaagaaggttggcagcggcatgcgtccatggaagagagtcttttctgtg
ctgcgctcccattcgctgttcctctacaaggacaagagggaggcggtgctccgcggggcc
accattggcggagcggccgaggacgagcagccaatcagcatccggggctgcctggtggac
attgcgtacagcgagaccaagcggaagcacgccctgcggctgaccactcaggacttctgc
gagtacctgctgcaggcggaagaccgggaggacatgctggaatggatcaaggtcatcagg
gagaacagcaagacggacaacgaggagctcggcttctccaggcaggccctcatcaacaag
aagctgaatgactacaggaaacagagtccaacaggcagcaagcccgactcctctcccagg
atgcatcgcatgaagcctcccttcatgcacagcaaggcagaaaacgctgccggggcgcca
cgctctcccaaaccagagggcaaagatgagagcggccctccgaagtctccgtggagcatc
aacatcatgaagaagacgaagaagtctggccctaaagcttttggtgtgcgcttggaggat
tgtcagccaggtgtaaataataagttcatcccgttgattgtggagatctgctgtgggctg
gtggaggagatgggtctggagtacacggggatctacagagtccccgggaacaacgccatg
gtgtcaagtcttcaggatcagctcaacaagggcgtggaaatcaaccctgcagaggagaag
tggcaagacctcaatgttgtcagcagtttactcaaatccttcttcaggaaacttccagag
ccgctcttcaccaacgacaagtacaacgacttcatcgacgcgaatcggatagacagtgca
tcagagagactgaagaccatgaataaactgatcagagacctgcccgattattattacgac
actctgaagttcctggtcgttcacctgaagacggtagccgacagctcagacaaaaacaag
atggagccccgtaacctggctctggtgttcgggccgactctggtccggacgtctgaggac
aacatgaaggacatggtcacacacatgcctgatcgctacaagatagtagagacgctcatc
caacattgcaactggtttttcgctgaggagcaagacgaggatgaaaagacgccggtggac
acgcaggacgtgcagcccgcccccaacatcgaccacctgctgtccaacatcggcaggacg
tgtctgctcggggaggcgtcagactcaaccaacagtgactcagccaaatcaaaggggtcg
tgggggtcaaagaaagacatcacatccaaggacttcctggctctgtccatcatgtcagct
gtcacgggccgcaaacgcaggaagcgccacaacgcccgccgcgtgggcagcagcactgac
gacgactcggagcacgagccaatcaaagccggacatttagtggcagggggggaagagggg
gcgggcttgccggaaggagacactgcgcctcgagcagagggagaggaggacgacgatgaa
gaggaagaagaggaagaccaggaagttgtagaaagcggagtgaaagaggtggtaggagag
caggtggtgacggttgatcccggccggacgtgcagtaaagaggaagaggaggcaggagga
aggccggcagccacgttgctgctagaggaggaggaggtccgggtggaggtgaaggggccg
ccgtggagagctccagaggacgctcgctctattgtttccggttactccaccctctccacg
ttggggcggagcctggggtccgaggggagggggggcgatgctgatgacgagcacagcgag
ctggtgagcgagacggacaacgagagcggcttcgcctcgcgctccctcacccaggagaga
ccggagaaacacccgacaccacccgtgaacacgcaggcggccccccgcagcttcctctac
acccactacaaggcccctgccctctcacccacaaacctgctggccccgcccacagcactt
acacacacgccagactctgcagacaggagtgagggagaggcgcggtccaccacaccttcg
tcctcctccttctcctcctcctccaccactcacagactgcactcgcggccttccttcaac
tcccacaagctgatccagtgcgacaccctggccaggaagaagctgaagtctgagaagggg
aaggctcggtccctggacctgctggagctgcaggccgccgtggccgaggcccacgctgct
ggctctgggtcagatggtacgtccagagcgaggagggagacctccagaactaacccctcc
tccggcagcagtcaggagagcctgcacccggcccggctcaaaccctccctgccccccagc
gaggcctcctccttcacccccaccggccctgggggcaggtctctggcggatcaggtccgc
gcccgcctgctgggctcggccgacgacctgcgcagcgtgggactgaggaaaccactctca
ccagagaccaggaggaagaggagggcctggcgcagacacacggtggtggcctccccaaca
gagatctctgagaagagacccccgctgaccgtcagtgacttccccctgtcccccataact
cagaaccagatgaaaacactgcctcgggacgcagaggggcttgaacaagaaccggcgaca
cgtcaagcccccacctccagattccaccagtacctgtga
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integrated database retrieval system
