Pseudochaenichthys georgianus (South Georgia icefish): 117451169
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Entry
117451169 CDS
T09629
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117451169 (rab40c)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pgeo04031
]
117451169 (rab40c)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
117451169 (rab40c)
GTP-binding proteins [BR:
pgeo04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
117451169 (rab40c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117451169
NCBI-ProteinID:
XP_033945217
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All DBs
Position
8:10544757..10580338
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AA seq
279 aa
AA seq
DB search
MGSQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
KRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWKPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANPAGGSKGNSLKRSKSIRPPQSPPQNCTRNNCKIS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccagggcagcccagtgaaaagctacgactacctgctcaagttcctcctggtg
ggagacagcgatgtgggcaaaggagagatccttgacagcctgcaggatggatctgcagag
tccccgtacgcgtacagtagtggtatcgactataaaaccaccaccatccttctggacggg
aagagagtgaagctggagctttgggacacctcaggccaggggaggttctgcaccatcttt
cggtcatattcccgcggggctcaggggatcctgctggtgtatgacatcacaaaccgctgg
tcctttgacggcatcgacaggtggatcagagagatcgatgagcatgcaccaggagtgcct
cggatcctcgttggtaaccggctgcatctggccttcaaacggcaagttcccacggagcag
gcccgggcgtacgccgagaagaacggcatgaccttcttcgaggtgagcccgctgtgcaac
ttcaacgtcatcgagtcgttcacggagctgtcgcgcatcgtgctcatgaggcacggcatg
gagaagttctggaagcccaacagagtgttcagcctgcaggacctgtgctgcagagccatc
gtgtcgtgcacgccggtccacctcatcgacaagctgccgctgcccgtcgccatcaagtcg
cacctcaagtccttctccatggccaacggcatgaacgccgtcatgatgcacggacgctcc
tactccctggccaaccccgccggcggctccaaggggaacagcctgaagcgctccaagtca
atccgtccgcctcagagcccgccgcagaactgcacccgcaacaactgcaaaatctcctag
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