Pseudochaenichthys georgianus (South Georgia icefish): 117451227
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Entry
117451227 CDS
T09629
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117451227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117451227
04147 Exosome [BR:
pgeo04147
]
117451227
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
117451227
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117451227
Exosomal proteins of other body fluids (saliva and urine)
117451227
Exosomal proteins of colorectal cancer cells
117451227
Exosomal proteins of melanoma cells
117451227
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
PHA_gran_rgn
ADIP
Peptidase_M2
YabA
PrgU
C2_C2CD3_N
DUF1672
Motif
Other DBs
NCBI-GeneID:
117451227
NCBI-ProteinID:
XP_033945320
LinkDB
All DBs
Position
8:complement(5741631..5749394)
Genome browser
AA seq
450 aa
AA seq
DB search
MSFHRSSSSSMQSSSGGSMIGMRAGSVYGGAGGKGSRISIAGGGGGSFSSISMGGGGGGS
YGRISMGGGGGGGGSYGSYGSTSFSMAGMNDSLIGNEKATMHNLNDRLATYLDKVRILEK
ANGELELKIRLFLESKAKPSSRDHRAFTATIAELTAKIHGAIRVNGTIHLTIDNARLAAD
DFRTKFENELAMRMSVEADTAGLRRVLGELTMSRSDLEIQIEGLREELIFLRKNHEEELL
AIHAQMTGQVHVELAAPQGPDLNKEMAEIRVYYESVTAKNQRDLEIWFQAKSEELNIQVV
TQTETLHTSRSEVSEVKRILQSLQVELQASLSNKSSMEASLAEIQVRFSMQLSQYQMQVS
SMEEQLMQLRADLERQGQEYQMLLDIKTRLEMEIAEYRRLLDGESSSSVSTSSSSSSRTM
TKTIVVVEEVVDGRVVSSSSSSTSGAILAK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccatcgttcttcatcttcctccatgcagagctcctccggtggctccatgatt
ggcatgagggcgggcagcgtgtacggcggggcgggaggcaaagggagccgcatctccatt
gcaggaggcggtggcggcagcttcagcagtatctccatgggaggaggcggtggcggcagc
tacggcagaatctccatgggaggcggtggtggcggaggcggcagctacggcagctacggc
agcacgagcttcagcatggctggcatgaatgacagtctcattgggaatgaaaaggccacc
atgcacaacctgaacgaccgcctggccacttacctggacaaggtgcgcatcctggagaag
gccaacggagagctggagctgaagatcagactgttcctggagagcaaggccaaacccagc
tcccgagaccacagagccttcaccgccaccatcgcagaactcaccgccaagattcacggc
gccatcagggtgaacggaacaattcatctcaccatcgacaacgccaggctggctgcagac
gacttcaggaccaagtttgagaacgagctggccatgcgtatgtctgttgaggctgacacc
gccggcctgaggagagtcctgggcgaactgactatgagccggtccgacctggagatacag
atcgagggtctgagagaggagctgatcttcctcaggaagaaccatgaagaggagctgctg
gcgatacatgctcagatgaccggccaggtacacgtggagttggccgcccctcagggtccc
gacctcaataaggagatggccgagatcagagtgtactacgaaagcgtcaccgccaagaac
cagagagacctggagatctggttccaggcaaagtcggaggagctgaacatacaggtggtg
acgcagacggagactctgcatacaagcaggtcggaggtgtcggaggtcaaacgcattctg
cagtctctgcaggttgagctgcaggcctcactgagcaataaaagctctatggaggcatct
ctggctgaaatacaggttcgcttctccatgcagctgtcccaataccagatgcaggtgagc
agcatggaggagcagctgatgcagctcagggctgacctggagaggcagggacaggagtac
cagatgctgctggacatcaagacccgcctggagatggagatcgccgagtacaggaggctg
ctggatggagagagcagcagcagtgtcagcacctcctcttcctcctcctcaaggaccatg
acgaagacaattgtggtggtagaggaggttgtggatggaagggtggtctcctcctcttca
tcctcgacctccggcgctatactggccaagtga
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