Pseudochaenichthys georgianus (South Georgia icefish): 117451235
Help
Entry
117451235 CDS
T09629
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5 isoform X1
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117451235 (recql5)
Enzymes [BR:
pgeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117451235 (recql5)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
117451235 (recql5)
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
EloA-BP1
Ribosomal_S17e
TFIIS_M
SRI
Motif
Other DBs
NCBI-GeneID:
117451235
NCBI-ProteinID:
XP_033945327
LinkDB
All DBs
Position
8:27479287..27521005
Genome browser
AA seq
998 aa
AA seq
DB search
MMTTTTTITQALKIHFGFDNFRSKIQEDVVKAIVKGDKDVFVCMPTGAGKSLCYQLPAVL
APGIALVISPLIALIQDQVDHLKSLNIPACSINSKLPAGERRLIFADLGSSSPKLKLLYI
TPEMVASPSFKPCLTDLCSRRLLSYLVVDEAHCVSQWGHDFRPDYLKLGKLRARMPGVPC
LALTATAPKNVQEDIVLSLTLRTPLSFISPVFRSNLHYDVIFRELLPNPFVHLHAFIQQS
LALDSGSKGQGCGIVYCRTRDSCESVAHQLTKLGVSAKPYHAGLKTGDRTESQNEWMQGK
VLVIVATISFGMGVDKANVRFVAHWNLAKSLASYYQESGRAGRDGLPSSCRIYYSAKDKE
QLNFLIRKEISRKQGKRGSLKDTDKATITDFDAMVAYCVQEACRHTTISKFFGNKTPNCA
GACDFCRNPKLVRAQLEKGSSLSTKTKAQSSQPSGPFGFLQGFYEGGKKGYGFERFDEGE
EDAEGGEDDGLTRKKEFSNLYKKQMTMRKGMTVRREGFVPPDDDCQLRDASSQKIPRLTV
KTRMHCLSLLKEALYGHQRADDTFNDTVSLAVNIELDVLEKSKSSNLYKAAILKRVSDIK
KTVPGERGDDGKAGSSDSAEYSSSSSFTEKQQGFTSASEIHSMKRKRFGAGNILQYLSKK
DPLVKSQEEEEEEEKEEVVPDNTSISPKTVEVDHEIDRPLVIVDEMEISSAEERKEEVIL
ISDNDEEETHPIETLEVKWFQYIPVEDIATPAGQKETQEEDEPVLIEEVTGEVTSQKASS
PPAKSCDPSERGRKETQEEDEPVLMEEVTGEVMSQKASSPPVKSCDPSERGRKETQEEDE
PVLMEEVTGEVMSQKASSPLAKSCDPSERGLKETQEEEEPALTEEHCGPSAKRVTFNPNV
QERPLNPASEPVTLKEAADIVVRYLNPFYSKGKFATKELFKSFARFLSHLLTEGSSKGKD
EVKAEAQTLIKKFFIKVQHCTSEADWTHLRQLHDGKRK
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaacaacaacaactataacacaagccttaaaaattcactttgggtttgacaac
tttcgatctaaaatacaggaggatgttgttaaagccatcgtcaaaggtgataaggatgtg
tttgtgtgcatgcccacgggagcagggaagtcgctctgctaccagctacccgcggtcctg
gctccgggtatcgctctggttatatccccactaatcgctctcattcaggaccaagtggac
cacctgaagagtctgaacatccccgcctgctccatcaactccaagctcccagcaggcgag
cgccggctgatctttgctgatttagggagcagcagtcctaagctcaagctgctttacatc
actccggagatggttgcctctccttcgttcaagccctgcctgacggacctgtgcagccgt
cgcctgctttcttacctggttgtggacgaggctcactgcgtctcccagtggggccacgac
ttcaggccggactacctcaaactggggaaactgcgtgctcgaatgccgggggttccctgt
ttggccctgacagctacagcacccaagaatgtacaagaggacattgttttgtccctgact
ctgcgcacgccgctgtctttcatttcacctgtcttccgcagtaacttgcactacgatgtg
atcttcagggagctgctgccaaaccccttcgtgcacctccacgccttcattcagcaatct
ctggccctggacagcggctctaaaggacagggctgtgggattgtgtactgtcggaccagg
gatagctgtgaatcggtggctcaccagctgaccaagctcggagtctcggccaaaccttat
catgcaggtctgaagacaggagatcgcacagagtcccagaatgagtggatgcaagggaag
gtgctggttatcgtagccaccatcagctttggtatgggcgtggacaaggccaatgtcagg
tttgtggctcactggaacttggcaaagtccctggccagctactaccaagagtcaggaaga
gccgggagagacggcctgccctcctcctgtcgcatatactactccgccaaagataaggag
caactgaacttcctcatccgcaaagagatttcccgcaaacaggggaaacgtggctctctg
aaggacactgacaaagcaaccatcacagactttgatgccatggtggcgtactgtgttcag
gaagcttgtcgccataccaccatctccaagttctttgggaacaagacgcccaactgtgct
ggtgcctgcgacttctgccgtaaccccaagctggtgcgagcccagctggagaaagggagc
tccctcagcaccaagaccaaggcccagagcagccagccctcaggacccttcggcttcctg
cagggcttctacgaaggagggaagaagggctacggctttgaaaggtttgatgaaggggaa
gaggacgcggagggcggtgaagacgatggcttaacgaggaaaaaggaattttctaacctc
tacaagaagcagatgaccatgcggaagggaatgaccgttcggcgggaaggctttgtccct
ccagacgatgactgccaactgagagacgccagcagtcagaagatccccagactcactgta
aagaccagaatgcattgcttaagcctcctgaaggaagcattatatggccaccagagggca
gatgacacgttcaatgacaccgtttccttagcagtcaacatagaactcgatgttttggag
aagagcaaatcttcaaacctgtacaaagctgccatcctgaagagggtatcggatatcaag
aagacagtacctggagaaagaggcgatgacggcaaggcgggcagcagtgattctgcggaa
tattcgtcgtcttcttcctttactgagaagcagcaggggttcacctctgcttctgaaata
cactcgatgaagcgtaagagatttggcgcgggcaacatcctccagtacttatcaaagaaa
gacccactggtgaagagccaggaggaggaggaggaagaggagaaggaggaggtggtacct
gataatacttcaatatctcctaaaacggtggaggtcgatcatgaaatcgatcgaccactt
gtcattgtggatgaaatggagataagttctgcagaggagaggaaagaagaagtcatctta
atctctgataatgatgaggaggaaacccatccaatagagacgctggaggtgaagtggttt
cagtacatacccgtggaggatatcgccactcctgcaggacagaaggaaactcaggaagag
gatgaacctgttctgatagaagaggtgactggtgaggtgacgtcgcaaaaagcgtcctct
cctccggcgaagagctgcgacccctcagagagaggacggaaggaaactcaggaagaggat
gaacctgttctgatggaagaggtgactggtgaggtgatgtcgcaaaaagcgtcctctcct
ccggtgaagagctgcgacccctcagagagaggacggaaggaaactcaggaagaggatgaa
cctgttctgatggaagaggtgactggtgaggtgatgtcgcaaaaagcgtcctctcctctg
gcgaagagctgcgacccctcagagagaggactaaaggaaacgcaggaagaggaggaacct
gctctgacagaggagcactgtggcccctcagcgaaaagagtgacctttaaccccaacgtg
caggagcgccctctgaaccccgccagcgagccggtgacgctgaaggaggcggcggacatc
gtggtccggtacctcaacccgttttactctaaggggaagtttgccaccaaggagctgttt
aagtcgtttgcacgctttttatctcacctcctcacagaggggagcagtaaagggaaagac
gaagttaaagccgaagcccaaactctcatcaagaagttcttcatcaaagtgcagcactgt
acgagcgaggcggactggacgcacctgaggcagctgcatgatgggaagaggaaatga
DBGET
integrated database retrieval system
