Pseudochaenichthys georgianus (South Georgia icefish): 117451288
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Entry
117451288 CDS
T09629
Symbol
rfx1a
Name
(RefSeq) MHC class II regulatory factor RFX1a
KO
K09173
regulatory factor X 1/2/3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117451288 (rfx1a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Other basic domains
RF-X
117451288 (rfx1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
117451288
NCBI-ProteinID:
XP_033945401
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All DBs
Position
8:complement(25672153..25689574)
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AA seq
1001 aa
AA seq
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MATSGYVGEIQPAAQPQGAVVTITSGQPDASSTPATSPQFLAEIQTAVAAPTVLTQTGQT
TPPDQALSISSPEPADGSQAQSNAQAQPPQTQYVTAEIQGSPSQSGNAQSTPQYIVVTVT
EGSLHSCDSMSDSSPPPAVVQTGVPTQVVQQVQSAQQRSVVQATSQIAKTEPGTQLSVTS
LQPVHIGQEFLPSTVLTALVRDRDLEECLQQHEIGQQEFQAEASADYMRECCGTPLYLPL
ELLQYYQSLYWLSVAAEKEIGAQPAITNSGPYQPPLQTTTATFQVQQQLTPVPVQHVYAN
QVQYVEGEETNYTTSTIRSSAFPYTDTPLYTQTTAAQYYDSQTASVSQASPGTPLTVSVT
AGTTGGVSMFVAQPTSAAGGGATVVTTGGTTNGAGDGAGTNGGAAGSYVIQGGYMLGSSS
TGTAGNSQSYSHTARTSPATVSITEGEEGSVPSADKKVQWLLDNYETAEGVSLPRSTLYC
HYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKAGSSLLRLM
EDQQHLAMRQQPFSQKQRLKPVHKVEGMTNGAAAGAGQQQQQQQQGAGQVDISTQVQQYQ
QFLDASRALPEFPDIDLQGKSLPEGIELEHIKSFQLLYREHCEAILDVMVNLQFTLVETL
WKTFWRFSQSQAGDATLAVHDESEKRLPKSCLVVLCKYDPVLRWSRDCDNSLYQALVEIL
IPDVLRPIPSALTQAIRNFAKSLESWLTNAMMNIPEEMVRIKVTSANAFAQTLRRYTSLN
HLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKLTLQQQ
NSLEQWAAWLDGVVSQVLKPYQQSPAFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSF
HLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFASLGRGLNQLDPDKEEEEEEEEESDD
EGQELSLPSDGGVLGDESLEPPSKLARMDQRVLFSTGSADD
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcaggctacgtaggtgagatccagccagcagcccaaccccagggggccgta
gtaaccatcacatcggggcaacctgacgccagttctacccctgcaacctccccgcagttt
ctggctgagattcagaccgctgtggccgctcccactgttctcacacaaacgggccaaact
actccccctgatcaagccctctccatcagctctccggagcctgcagatggttcccaagcc
cagtccaacgctcaagcccagcctcctcagacacaatacgtgaccgcagagatccagggc
tccccctcacagtctggaaatgctcaaagcacccctcagtacattgttgttacagtcaca
gagggctcccttcactcctgtgacagcatgtcggactctagcccccccccagctgtggtg
caaacaggagttcccacgcaggttgttcaacaggttcagtcagcccaacagagatctgtg
gtgcaggctacttctcagatagccaagactgagcctggtacacagctcagtgtcaccagc
ctgcaacctgttcatatcggccaggagttcctccctagcaccgtgctgacagcattagtc
agggatagggatcttgaagaatgtctgcagcaacatgagataggacagcaagagttccag
gccgaggcttcagcagactacatgagagaatgctgcggcacacccctctaccttcccttg
gagctccttcagtattaccaatcactgtactggctctctgtggctgcggagaaagagata
ggagcccaacctgcaatcacaaactcaggcccatatcagccaccactgcagactacaact
gccactttccaagttcagcagcagctcacaccagtgcccgtgcaacatgtgtacgccaat
caagtgcagtatgtggaaggagaagagaccaactacacaacaagcactatccggtcgagc
gcctttccctacactgacacgccgctgtacacccagaccacagctgcccagtattatgac
agtcagacagcttctgtctcacaggcctcccctggcacacctctaaccgtctctgtgact
gctggcacaacagggggggtgtccatgtttgttgcccagcccaccagtgcagcaggggga
ggggccacagtggtgaccacaggtggcaccaccaatggggcaggggatggggcaggaacc
aacggtggcgcagcaggcagctatgtgatccagggggggtacatgctgggcagcagtagc
acagggacagctggcaacagtcagagctactctcacaccgcccgcacctctccagccact
gtgagtattacagagggcgaggagggtagcgtgccgtcggcagacaagaaggtacagtgg
ttgctggacaactatgagacagctgaaggagtgagtctgccacgatccacgctctactgc
cactatctgctgcactgccaggagcagaaactggagcctgtcaatgctgcctccttcggg
aaactcattagatctgtgttcatggggctacgcacacgacgcctcggcacacggggtaat
tctaaataccactactatgggctgaggatcaaggcaggctcttctcttcttcgtctgatg
gaagatcagcaacatctggccatgaggcagcagccattctcacagaaacaaaggttgaag
cctgtgcataaagtcgagggaatgactaacggcgcggcagcaggagctggccagcagcag
cagcagcagcagcaaggggccggccaggtggacatcagcacccaggtccagcagtaccag
cagttcctagatgcatcccgagccctcccagagttcccagacatcgacctgcaggggaag
tctctgcctgagggaatcgagctggagcacatcaagagctttcagctgctgtacagagag
cactgtgaggctattcttgatgtgatggtcaacctgcagttcactctggtggaaactctg
tggaaaaccttctggaggttcagccagagtcaggcgggagacgccacgttggctgttcat
gacgagtctgagaagcggctgcctaagtcctgcctggtggtgctgtgtaagtacgacccg
gtgctgcgctggagccgggactgtgacaacagcctgtaccaggccctggtggagatcctc
atcccagacgtcctcaggcccatccccagtgccttaactcaagccatccgcaactttgcc
aagagcctggagagctggctgaccaacgccatgatgaacatcccagaagaaatggtccgt
atcaaggtgacctcagccaatgcgtttgcccagacgctgcgtcgctacaccagtctgaac
cacctggcccaggcggcccgcgccgtgctgcagaacacggcccagatcaaccagatgctc
tccgacctcaaccgcgtggactttgctaacgtccaggagcaggcttcctgggtgtgccgg
tgtgaggaccgcgtggtgcagcggctggagcaggacttcaagctgaccctgcagcagcag
aactccctggagcagtgggcagcgtggctggacggggtggtctcccaggtcctgaagccc
taccagcagagccccgccttccccaaagccgccaagctcttcctgctcaagtggtccttt
tacagctccatggtgatcagagatctgaccctgaggagcgcagccagtttcggctccttt
cacctgatccgcctgctgtacgatgagtacatgtactacctgatagagcacagagtggcc
caggctaaaggagagacccccatcgctgtcatgggagagtttgccagtttaggccggggg
ctcaaccagctggatcctgacaaagaagaggaagaggaagaggaggaggagagtgatgat
gaaggtcaggagctgtcacttccttcagacgggggggtgctaggagacgagtctctggag
ccgccttccaagctggcccgaatggaccagagagtcctgttcagcaccggatcagctgac
gactga
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