Pseudochaenichthys georgianus (South Georgia icefish): 117451295
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Entry
117451295 CDS
T09629
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04136
Autophagy - other
pgeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117451295 (wipi2)
04136 Autophagy - other
117451295 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117451295 (wipi2)
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117451295 (wipi2)
Membrane trafficking [BR:
pgeo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117451295 (wipi2)
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117451295 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
DUF7165
Beta-prop_Vps41
Beta-prop_TEP1_2nd
BCAS3_WD40
Beta-prop_IFT140_1st
VID27
Motif
Other DBs
NCBI-GeneID:
117451295
NCBI-ProteinID:
XP_033945414
LinkDB
All DBs
Position
8:30871749..30888149
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AA seq
426 aa
AA seq
DB search
MNLASQSGDAGGSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECPDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQKEKYVPAEEPTTWGGYLGKVLMASTTYLPSQVTEMFTQ
GRAFATVRLPFCGHKNICALAVIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHRLD
GSAEPSNEILEQSHDRPLVAQTYSAAVTKGYSEEQGAVGGAGLEDDLNDLRLEEENEQPP
LILETD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggccagtcaaagcggggatgcaggcggaagccagctcctcttcgccaacttc
aaccaggacaacacgtccttagcggttggcaccaaatcaggatacaagtttttctccctg
tcctctgtggataaattggagcagatatatgaatgtccggacacggaggatgtgtgtatc
gtggagcgtctgttctccagcagcctggtggccatcgtgagcctgaaggccccgaggaag
ctcaaagtctgtcacttcaagaagggaacggagatctgcaactactcctactccaacact
atactggccgtcaaactcaacagacagaggctgatagtctgtctggaggagtcactttac
attcacaacatccgagacatgaaagtgctgcacactatcagagaaaccccccccaaccca
tcaggattgtgcgccctctccatcagcaatgataactgttatctggcctacccaggcagc
gctacgataggagaggtccaagtgttcgacacagtcaacctgcgagcggctaacatgatc
ccagctcacgacagcccgttggcggcgctggctttcgacgccagtggaaccaaactggcc
accgcctcggagaagggcacagtcatccgagtcttctcaatcccagagggacagaagctc
tttgagtttcggagaggagtcaagaggtgtgtgagcatctgctcgctggcgttcagcatg
gagggcctgtacctgtcggcctccagcaacacagagaccgtccacatcttcaaactagag
acgcagaaggagaagtatgtgccagcggaggagcccaccacatggggggggtacctgggg
aaggtgctgatggcgtccaccacctacctgccttctcaggtgacggaaatgttcacacag
ggccgagccttcgccaccgtacgcctgcccttctgcggacacaagaacatctgcgcctta
gctgtgattcagaagattccccggttgctggtggctgcggccgacggttacctgtatctg
tacaacctggatccacaggaggggggggaatgcactctcatgaagcagcacaggttagac
ggcagcgctgagccatccaatgagatcctggagcagtcgcacgaccgccctctggtggcc
cagacctacagcgccgccgtcactaaaggttacagcgaggagcagggcgccgtagggggg
gcggggcttgaagacgacctgaacgacctgcgcttagaggaggagaacgagcagccgccg
ctcatcctggaaactgactga
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