KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117451357
Entry
117451357         CDS       T09629                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgeo03019]
    117451357 (atxn2l)
Messenger RNA biogenesis [BR:pgeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117451357 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 117451357
NCBI-ProteinID: XP_033945512
LinkDB
Position
8:complement(6855104..6886533)
AA seq 929 aa
MHMTKKTRNTMKPPSQSPPVSSLVFDGVYNNARMLHFLTAVVGSTCDVRVKNGAAYEGVF
KTLSSQCELAVDAVHKQSNGDGDGGGGGEEGGGSQSSQPKIEDITDTMIFSPADLVTMTC
RDVDLNFAVRDTFTDTSISATRVNGDHREKVLQRWDGNGNGENFELEADASNGWDANEMF
KFNEETYGVKSTYDSSLSMYTMPLEKGTSEGFRQREARAARLANEIEGSLQYRRRVSLEN
DEGRSEEDKYSSVVREREERASPGFIPTGREGKYIPLPQRAREIGMGRSGASGRTAPPSS
SRHPPAGASSPKPPSDRSSPLSVRNSYSPHQSQGSPPAAGSPPCTNHVLPNSLSHPQALG
DNARSSVNGVTSRTSPKSQRLQSRTLRNPNSQSSAAVSRATPLDLPMGGPVFLDSNSTSA
VTMATTGAKASGPTPLFTVDVNEILNTAAKERSESLAEGKSTKAPSVQQRNQLEELRKFG
KEFRLQPTSSPTASPASADPAQHDSSPPKPVPSSAQDLQQTPEAPAGPQASGPEGPQPGT
SQPAPGSEESCSESGERPEAATQMKISTLNPNAKEFQPIKVNIVQKPAPTPTPPRPTPPS
PSLILAPQGQPGGGAIYNNPPGHYLSYMSPLHIQGHQIQAPQMYQYTINQGKYPRAKGPV
VGQRPEHHPSSTSPMISAAASAAGPPLVASPYPQSYLQYGQMIQTLPPHFHGQPVYSMLP
GGARMLTSGAPPQQMGPPGGQYPGQAESLQGQQQAMYAQSFSHHSGAMHHPQPSSTPTGN
QPPPQHSAPSPGHNQSSQAGPQPQNMFHTGGLSAPTPPNMQPGHSSPQASYAMQGYSLPT
HQALPHGFPSISQLTQAHVAGGMAGPHHSAGHGLPPVMLHYVSPQQGGGSNPQHGPQQGA
PQHFYIGHPQAVQVQAHPSQQLSFHPSAN
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgcacatgactaaaaagaccaggaacacaatgaaacctccatcacagtcacctcctgta
agcagtttagtatttgatggcgtctacaacaatgccagaatgctccatttcctcacagca
gtggtgggctccacctgtgatgtgagagtgaaaaacggcgcagcctacgagggagtcttt
aagactttaagctcacagtgtgaactggctgtggatgctgtccataaacagagcaatgga
gatggtgatggaggaggaggaggcgaggaaggaggaggaagccagtcctctcaacccaag
atcgaagatatcacagacaccatgatctttagccccgccgacctggtgaccatgacctgc
cgcgatgtcgacctaaactttgctgtcagagacacgttcactgacacgtctatcagcgca
acccgggtgaacggggaccaccgggagaaggtcctgcagaggtgggatggaaacggaaac
ggagaaaactttgagctggaagcagacgcgtctaacggctgggacgccaacgagatgttc
aagtttaacgaggagacgtacggcgtcaagtccacctacgactccagcctctccatgtat
accatgcctttggagaagggcacctctgagggattccgtcagagggaagcgcgagccgct
cggctggccaatgagatcgagggcagcctgcagtaccgccggcgcgtttctctggagaac
gacgagggccgcagcgaggaggacaaatacagctcggtggtgagggagagggaggagagg
gcgagccccggcttcatccccaccggcagggaaggtaaatacattcccctccctcagcgg
gctcgagagatcggaatgggccggtccggggcctctgggcgcaccgcccccccttcctcc
tccagacaccccccggccggcgcctcctcccccaaacccccgtctgaccgcagcagcccg
ctgtccgtcagaaattcctactctccccaccaatcacagggcagcccacccgcggccggc
agccctccctgcaccaatcacgtcctcccgaactccctctctcacccacaggccctcggt
gacaacgcacgctcttctgtcaacggagttacttccagaacttcccctaaatcccagaga
ctccagagcaggaccctgcgcaaccccaactcccagtcctcagctgcagtctctcgagcc
acgcccctcgatctcccaatgggcggccctgttttcttggactccaactccacctccgct
gtcaccatggcaacaaccggcgccaaagcctccggcccgaccccactgttcactgtcgat
gtgaatgagatcctgaacacagcagctaaagagagatctgaaagtctggctgaagggaag
agcaccaaagctccctctgtgcagcaaaggaaccagctggaggagctgcgcaagttcggc
aaagagttccggctgcagcccacctcctccccaacagcgagcccagcctctgcagatcct
gctcagcacgactcctccccgcccaaacctgttccctcctctgcccaggacctgcagcag
acccctgaggctcctgctggcccccaggcctcagggccggaggggccgcagcctgggacc
agccagccggcccccggcagcgaggagagctgttcagagagcggagagcggccagaggct
gctacgcaaatgaaaatctcaacattgaatccaaatgcaaaagaatttcaacccataaaa
gtgaatatagtccagaagcctgcaccgacccccacccctcctcggccaacccctcctagc
ccctctctgattctggccccccaaggacagccagggggaggcgccatctacaacaacccc
ccgggacactacctgtcctacatgtcccccctgcacatccaaggacaccagatccaggct
cctcagatgtatcagtacaccatcaaccagggcaaataccccagagccaaaggcccggtg
gtgggccagcgtccggagcaccatccctcctccacctcccccatgatctccgctgcagcc
tcagcagcaggacccccactggtggcctcaccgtacccccagtcctacctgcagtacggt
cagatgatccagaccctgcccccccatttccacggacagccagtttactcaatgctgccg
gggggagcgaggatgctgacatcaggggccccccctcagcagatggggcctcctgggggc
cagtaccccggccaggctgagagcctgcaggggcaacagcaggccatgtatgctcagtcg
ttctctcaccactcgggcgccatgcatcaccctcagccctccagcacccccactgggaac
cagcccccgccccagcactcagcccccagtccaggacacaatcagtcgagtcaggctggc
cctcagcctcagaacatgttccacactggaggcctgtcggcccccacccctcctaacatg
cagccgggccacagctccccccaggcctcctacgccatgcaaggctacagcctgcccacc
caccaagctctgccccacggcttcccctccatcagccagctcacacaggctcatgtagca
ggaggcatggcgggcccccaccactctgctggtcacggcctgccgcccgtcatgctgcac
tacgtctcccctcagcagggcgggggctccaacccccagcacggcccccagcagggggcc
ccacagcacttctacatcggacacccccaagctgtccaggtgcaggctcacccctcccag
cagctgtccttccacccctctgcaaactga

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