Pseudochaenichthys georgianus (South Georgia icefish): 117451361
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Entry
117451361 CDS
T09629
Symbol
spns1
Name
(RefSeq) protein spinster homolog 1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117451361 (spns1)
Transporters [BR:
pgeo02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
117451361 (spns1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
OATP
Sugar_tr
MFS_4
Motif
Other DBs
NCBI-GeneID:
117451361
NCBI-ProteinID:
XP_033945521
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All DBs
Position
8:6806027..6828339
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AA seq
504 aa
AA seq
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MSLSEQASDVVPFFSDESEAEGPEDQGGGAPRPQEEEEASGVSKVRALLTVLVLCYINLL
NYMDRFTVAGVLPDIEHFFGINDEKSGLLQTVFICSYMFLAPVFGYLGDRYNRKYIMSVG
ILFWSLVTLASSYTPKEHFWALLLTRGLVGVGEASYSTIAPTIIADLYVKAKRTNMLSIF
YFAIPVGSGLGYIVGSQVGNIAHDWHWALRVTPGLGLVAVVLLLVVVQEPKRGAIEARTD
LHHTSWLTDVQVLSKNRSFVLSTLGFTAVAFVTGSLALWAPTFLFRAAVVNGDRSPCFEG
NCASTESLIFGTITVVTGVLGVSSGVIISRKLRTRTARADPLVCAAGLLLSAPFLYLAIV
FAQSSTVATYIFIFLGETFLSMNWAIVADILLYVVVPTRRATAEALQIVFSHLLGDAGSP
YLIGVVSDSLQQTDSFLWQFRSLQLSLLLCSFIAVIGGGFFLLTALFIEHDRNRAENYVP
TGDEPIVVPKSGRSTRVPVSSVLI
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgagcgagcaggcgtcggacgtggtgccgttcttctccgatgagagcgaggcg
gagggtcctgaggatcagggcgggggggctccgcgcccgcaggaggaggaggaggcgagc
ggcgtgtcgaaggtccgagccctgctgaccgtcctcgtcctctgctacatcaacctgctc
aactacatggaccgcttcactgtggcaggtgttctccccgacatcgagcacttttttggg
attaacgatgagaaatccggcctgctccaaactgtttttatctgcagctacatgttcttg
gctcctgtgtttggttacctgggcgacaggtacaacaggaagtacatcatgagcgtgggc
atcttgttctggtccctggtgactctcgccagctcctacaccccaaaagagcacttctgg
gccctgctgctgacccggggcctggtgggcgtcggagaggccagctactccaccatcgcc
cccaccatcatcgcagacctctacgtgaaggcgaagaggaccaacatgctctccatcttc
tatttcgccatccctgtcggcagtgggctgggatacatcgtggggtctcaggttggaaac
atagcgcatgactggcactgggctctgagggtgaccccaggcctgggtctggttgccgtg
gtgctgctgctggtggtggtgcaggagcccaagagaggggcgatcgaggcccggaccgac
ctgcaccacaccagctggctgaccgacgtccaggtgctcagcaagaaccgcagcttcgtg
ctctccaccctgggcttcacggccgtggcctttgtgaccggctctctggctttgtgggct
cccacgttcctcttcagagccgccgtagtcaacggggacaggtcgccctgctttgagggg
aactgcgcctccacggaaagtctgatcttcggcaccatcaccgtggtgacgggggtgctg
ggtgtgtccagcggcgtgataatcagcaggaagctgcggacgcggaccgcccgcgccgac
ccgctggtctgcgccgccggcctgctcctctccgcgcccttcctctacctcgccatcgtc
ttcgctcagtccagcaccgtcgccacttacatcttcatcttccttggagagaccttcctg
tccatgaactgggccatcgtggccgacatcctgctgtacgtggtggtcccgacgcgccgc
gccacagctgaggctctgcagatcgtcttctctcatctgctgggagacgccgggagcccg
tacctcataggagtggtgtcggactccctccagcagacggactccttcctgtggcagttc
cgctccctgcagctctccctgctgctctgctccttcatagctgtgatcggggggggcttc
ttcctcctcaccgccctcttcatcgagcatgaccgcaaccgcgccgagaactacgtcccc
acaggtgacgagcccatcgtggtcccgaagagcggccgctccaccagagtcccggtgtcc
agcgtgctgatctga
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