Pseudochaenichthys georgianus (South Georgia icefish): 117451463
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Entry
117451463 CDS
T09629
Symbol
grin2ba
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04020
Calcium signaling pathway
pgeo04080
Neuroactive ligand-receptor interaction
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117451463 (grin2ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117451463 (grin2ba)
04082 Neuroactive ligand signaling
117451463 (grin2ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117451463 (grin2ba)
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
117451463 (grin2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Spt20_SEP
TERB2
TFIIA
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
117451463
NCBI-ProteinID:
XP_071060221
LinkDB
All DBs
Position
8:32686695..32924821
Genome browser
AA seq
1740 aa
AA seq
DB search
MRLGLAKHKVLLSHSSTMPVYGCRTPSSPGGRSSPSAPSSTTTTPSVASTERGTSDPPHP
PPPPSLHRPPSHCLSLLLLLLCLLHLPPACHSRREKGGGGGEEEEEEEEGGGGGGGHYVP
IPQPPPHHMALPNILRGLSIAVVLVGNSSEMALAGGREKEDFLHMAPNVEVLTMNETDPK
SIIKSICDLMTEHWLQGVVFGDDTDQEAIAQILDFISAQTHIPILGVRGGSSMIMAAKDD
DSMFFQFGPSIEQQASVMLNIMKAYDWYIFSIVTTYYPGYQDFVTKIRSTIENSFVGWEL
EEVILLDMSVDDGDSKIQNQLKKLQSPVILLYCTKEEANTIFEVSHSVGITGYGYTWIVP
SLVAGDTIVVPAEFPTGLLSVSYDEWDYNLEARVRDGVAIITMATSTMMMDRGPHTLLKS
ECHGAPDKKTPISGNPNEVLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLNKERQWERV
GKWENGSLSMKYHVWPRYELYGGAATREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTV
PCRKQLKTLNETKDSGIYIKRCCKGFCIDILKKIAKQVKFTYDLYLVTNGKHGKKINGTW
NGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPF
SADVWVMMFVMLLLVSAMAVFIFEYFSPVGYNHCLADGREPHGPSFTIGKAIWLLWGLVF
NNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQSP
NDFSPPFRFGTVPNGSTERNIRNNYPEMHAYMTKFHQKNVNEALGSLKAGKLDAFIYDAA
VLNYMAGRDEGCKLVTIGSGYIFATTGYGIAIQKESLWKRHVDLAILMLFGDGEMEELES
LWLTGICHHEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFICEHWFYWQLRFCFMGTC
SGQPGFVFSISRGIWSCIHGVQIEEKSNSSALNSPSATMNNTHSNIMRLLRTAKNMASLS
GVNGSPHSALDFIRRESSVYDISEHRRSLAGHSDCKAPYPPEDNMFSDYISEVERTFGNL
HLKDSNLYQDHYLHHHGSTLGLNGPPPPRPHSLGSASSLEGGMFDCESIGGGVAPIFTTQ
PCSALTHRNMSKFDLLSGQTPPSGQSFKGGLPDLYGKFSFKGGASSSTFIPGHGYCGGRG
DDDGNMDRRSDVSDISTHTVTYGNLEGNAKKRKQYRDSLKKRPASAKSRRELDEIELGYR
RKPYHISHHHYHGHRSASPPLLPPERKRGLSGNSDGNYMFREKESVRDFYLDQFRPKEGV
PQWEHVDLTEGPGSRDGGNCTTLVPVDDFLKQSKPKKSDLKSGVAGSGLAGGEWECRNCR
ASGGGKQMSMHGGVYGGGMSCGTSGGGGNSRPSSATCMRCEGCKKTGNLYDISEDNNHLL
EQMGGGNGVGGGGGVMGPQSQGQQRRKSGGLGKPLRRQHSYDAFVDLQKEESGGMGSLMG
LGGVGGGMGSQVMGGMLPPPRSVSLKEKERYMEGTSPFAHIFERHGGSERERERDRDPLF
YEGRKRPGSPFGLFRGDGLHRRSIGERDMRDRDRSLMEGGGGGGFSLSKSLYPDRVNQNP
FIPTFGDDQCLMHGAKQYYMKKQQQQQQQQQQQQQQQQQQQQQVPKPSRSDFRSQMSTTS
YLPASATAGVMSNVTPRFPKELSLGGMNHHGSMLGVGPQRPFNGSNGHVYEKLSSIESDV
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgagacttgggctggcaaaacacaaggtattactctcccactcctccaccatgcctgtt
tacggctgccgcaccccctcctcacctgggggtcgatccagtccctccgccccctcctcc
accacgacgaccccttcagtcgccagcaccgagagaggcacatcggaccctcctcaccct
ccaccgcctccatcgctccaccggcccccctcccactgcctctctctcctcctcctgctg
ctctgcctcctccacctgccgccggcctgccactcccggagagagaagggaggaggagga
ggggaggaggaggaggaggaggaggaggggggaggtggtggtggcggccattacgtgcca
atcccccagccccctccccaccacatggcgctgcccaacatcctgcgaggcctcagcatc
gccgtggtgctcgtggggaactctagcgagatggcgctggctggagggcgggaaaaagaa
gacttcctccacatggcgcccaacgtggaggtgctgacgatgaacgagacggaccccaag
agcatcatcaagagcatctgcgacctgatgacggagcactggctgcagggcgtggtgttc
ggggacgacaccgaccaggaggccatcgcacaaatcctcgacttcatttcggcccagacg
cacatccccatcctgggagtccgcggggggtcgtccatgatcatggctgccaaggacgac
gactccatgttctttcaattcggcccgtccatcgagcagcaggcctcggtcatgctgaac
atcatgaaggcttacgactggtacatcttctccatcgtcaccacgtactacccggggtac
caggactttgtcaccaagatccgtagcaccatcgagaacagctttgtgggctgggagctg
gaggaggtcatactgctcgacatgtccgtggatgacggagattcaaagatccagaaccag
ctgaagaagctccagagccccgtcatcctcctctactgcacaaaggaggaggccaacacc
atcttcgaggtgtcgcactctgtcgggatcaccggatacggctacacatggatagtgccc
tcgctggtagctggagacactattgtagtgcctgcagagttcccgacaggtctgctttct
gtgtcctacgacgagtgggactacaacctggaggcccgtgttcgtgacggcgtggccatc
atcaccatggcaacgtccaccatgatgatggaccgcgggccgcacaccctgctgaagtcc
gagtgccacggagctccggacaagaagacccccatctcaggcaaccccaacgaagtgctc
aggtacctgatgaatgtgacgttcgaggggcgtaatctgtcgttcagcgaagacggatac
cagatgcaccccaagctagtcatcattctgctcaacaaggagaggcagtgggagagggtg
ggtaaatgggagaacggttccctgtccatgaagtaccacgtgtggcctcgttatgaactg
tatggcggggccgcaaccagggaggacgaccacctgtccatcgtgactctggaggaagct
cccttcgtcatcgtggaagacgtggatccgctcagcgggacctgcatgaggaacaccgtg
ccctgccggaaacagttaaaaacactcaatgaaacgaaggactctgggatctacataaag
cgctgctgtaagggattctgcatcgacatcctgaagaagatcgccaagcaggtgaagttc
acctacgacctttacctggtgaccaacggcaagcacggaaagaagatcaacggcacgtgg
aacggcatggtgggagaggtggtgttgaagaacgctcacatggccgtcggctccttgacg
atcaacgaggagaggtcggaggtcatcgacttctccgtccccttcatcgagacgggcatc
agcgtcatggtctccaggagcaacggcaccgtgtcgccctccgccttcttagagcccttc
agtgcggatgtgtgggtgatgatgttcgtgatgctgttgctggtgtcagcaatggctgtg
tttatattcgagtacttcagccccgtgggctacaaccactgtctggctgacggcagagag
cctcacggtccgtccttcaccatcggtaaggccatctggctgctgtggggtctcgtgttc
aacaactccgtgcccgtgcagaaccccaaaggcaccaccagtaagatcatggtgtcggtg
tgggccttcttcgccgtcatcttcctcgcctcctacactgccaacctggccgccttcatg
atccaggaggagtacgtggaccaggtgaccggcctctccgacaaaaagttccagagccca
aacgacttctcgcctccgttccggttcggcaccgtcccgaacggcagcacggagaggaac
atcaggaacaactatccggagatgcacgcatacatgaccaagtttcatcagaagaacgtc
aacgaagctctggggagtctgaaggccggcaaactagacgctttcatttacgacgcggcc
gtgctgaactacatggccggtcgggatgagggctgtaagctggtgaccatcggcagcgga
tacatattcgccaccacggggtacggcatcgccatccagaaggagtcgctttggaagagg
cacgtcgacctggccatcctgatgctctttggagacggtgagatggaggagctggagtcg
ctctggctgacgggaatctgccaccacgagaagaacgaggtgatgtccagtcagctggat
attgacaacatggcgggtgttttctacatgctgggcgccgccatggctctgtcgctcatc
accttcatctgcgagcactggttctactggcagctgcgcttctgcttcatgggaacctgc
tccggacagccgggcttcgtcttctccatcagcaggggcatctggagctgcatccacggg
gtgcagatcgaggagaagagcaacagctcggcgttgaactctccatccgccaccatgaac
aacacccactccaacatcatgcgcctcctacgaaccgccaagaacatggcgtccctgtcc
ggagtgaacggatcgccccacagcgcgctggacttcatccgccgcgaatcctccgtctac
gacatctccgaacaccggcgcagcttggcgggacactcggactgcaaggcgccgtaccca
ccggaagacaacatgttcagcgactacatcagcgaggtggagaggacgtttggtaatctc
cacctgaaggacagcaacctgtaccaggatcactacctgcaccaccacggctcgacgcta
gggctcaacggaccgccgccgcccaggcctcatagcttgggtagcgcaagttctctggaa
ggggggatgtttgattgtgagagcattggaggaggggtggcgcctattttcaccacccag
ccctgctcggcattgacccacaggaacatgagcaagtttgatttgctgtccggacaaact
cctccctcagggcagagctttaagggaggcttgccggacctttacgggaagttttccttt
aagggaggcgcctcaagctccacgtttatccccgggcacggatactgcggaggaagagga
gacgacgatgggaacatggatcgacggtcggacgtctcggatatatccacgcacacggtg
acttacggaaacctggagggtaacgccaagaaacgcaaacagtaccgcgatagcctgaaa
aaaaggccggcctctgccaagtccagacgggagctggacgagatcgagctgggctaccgg
aggaaaccctaccacatcagccaccatcactaccacggccaccgctccgcctccccaccg
ctgctgcccccagaacggaagagaggcttaagtgggaacagcgacgggaactacatgttc
agagagaaggaaagcgttagggatttctatttggaccagtttcggcccaaagagggcgtt
cctcagtgggaacatgtggacctgacggaaggccctgggagtagagatggaggcaactgc
accaccctggttccagtggatgactttcttaagcaaagcaaacccaaaaagtcagattta
aagagtggtgtggcaggatctgggctggcagggggagagtgggagtgcaggaactgtcgg
gctagcggaggaggcaagcagatgtcgatgcacggtggtgtgtacggtggtggtatgagc
tgtgggacttcgggaggcggaggtaacagccgcccaagctctgcgacctgcatgcgctgc
gagggttgtaaaaagacaggaaacctctacgatatcagcgaggacaacaaccacctcttg
gaacagatggggggagggaatggcgttggtgggggaggtggagttatgggccctcaatct
cagggccagcagaggaggaagagcggaggacttgggaagccactgaggcggcagcactca
tacgacgcttttgttgaccttcagaaagaggagtcgggcgggatgggtagtttaatgggt
ctgggaggtgttggggggggaatggggagccaagttatgggagggatgctgcccccaccc
aggagcgttagcttgaaggagaaagagcgctacatggagggtaccagccccttcgcacac
atattcgagcgccacgggggctcggagagagaacgggaacgagacagggacccgttgttt
tacgagggtcgcaaacgacccggatcaccgttcggtttgttcagaggcgacggccttcac
cgccgctccatcggagagagagacatgcgagacagggacaggtctctgatggagggagga
ggcgggggagggttctctttatccaaatctctttacccagacagggtcaaccaaaacccc
tttatacccacctttggcgacgaccagtgtctgatgcacggagccaaacaatattacatg
aaaaagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcagcaagttcccaaaccaagccgaagtgacttcaggagccagatgagcacgacgtca
tatctgccggcgtccgccacggccggggtgatgtccaacgtgacgccccggttcccaaaa
gagctcagcctcggtgggatgaaccaccacggctccatgctgggggtcggcccccagcgt
cccttcaatggaagcaatggccatgtgtacgagaaactgtccagcattgagtctgacgtg
tga
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