KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117451496
Entry
117451496         CDS       T09629                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A isoform X1
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04144  Endocytosis
pgeo04517  IgSF CAM signaling
pgeo04530  Tight junction
pgeo04810  Regulation of actin cytoskeleton
pgeo05100  Bacterial invasion of epithelial cells
pgeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117451496
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117451496
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117451496
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    117451496
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117451496
   05100 Bacterial invasion of epithelial cells
    117451496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pgeo04131]
    117451496
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pgeo04812]
    117451496
Membrane trafficking [BR:pgeo04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    117451496
Cytoskeleton proteins [BR:pgeo04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     117451496
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st WDR55 Beta-prop_HPS5 EIF3I Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Rax2 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th SH3_3 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 117451496
NCBI-ProteinID: XP_033945713
LinkDB
Position
8:complement(119691..144432)
AA seq 381 aa
MSLYSFGLEPLSCHSWNKDRTQIAVSPNNNVVDIYEKKGNEWAKIHELTEHSGRITGIDW
APESNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVRWSPLENKFALGSGARLI
SVCYFEKENDWWLSKHIKKSIRSTVLSLDWHPNNILLAAGSADFHCRVLSTYIKDIEDKP
GPTAWGAKMPFGEVLLEHKDCGGWVHGVTFSPSGDQLAWTAHNSSITVADAAQGKEITML
TNNRLPLLDVLYVSPTELVAAGHDCCPYQFSYKGPGALEFVKKLDIPKQSSKGSLTAMQH
FQNLDKRATDDDTNEVGTLHQNSITQLCVVSGEKAKVERYSSVGLDGALVIWDFKSAVIP
GVHAAARLPPSTSFHHIQYQS
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtcgctctacagttttggactggagccactctcctgccactcctggaacaaagacaga
acccagattgcagtgagtcctaacaacaatgtggtggacatctatgaaaagaaaggcaat
gaatgggccaagatccacgagctgactgagcacagtgggcggatcacaggcattgactgg
gccccagaatccaaccgcattgtcacatgtgcctctgaccgcaacgcctacgtgtggacc
ctaaaggacggcgtgtggaagcccaccctggtgctggtgcgcatcaaccgtgcagccacc
tgtgtgaggtggtccccgctggagaacaagttcgccctgggcagcggagcgcgcctcatc
tccgtctgctacttcgagaaggagaacgactggtggctgagtaagcatatcaagaagtcc
attcgctccaccgtcctgagtctggactggcaccccaacaacatcctgctggctgctggc
tctgcagacttccactgcagggtgttgtcaacctacatcaaggacattgaggacaagcct
gggcccactgcctggggggccaagatgccgtttggagaggtgctgctggagcataaggac
tgtggaggctgggtgcatggcgtcaccttctcccccagcggagaccagctggcctggacg
gcccacaacagcagcatcactgtggctgatgccgcccaggggaaagagatcaccatgcta
accaacaaccgcctgcccctgctggatgtcctgtacgtcagccccacggagctagttgct
gcgggtcatgactgttgcccctaccagttcagctataagggtccaggtgctctggagttt
gtgaagaagctggacatccccaagcagtcctccaaaggcagcctgacagccatgcagcac
ttccagaacctggacaagagggccactgacgacgacaccaacgaagtggggacccttcac
cagaacagcatcacacagctgtgtgttgtgtctggggagaaagccaaagtggagagatac
agcagtgtgggtctggatggagccttggtgatctgggattttaagtcagctgtgattcca
ggtgttcatgctgccgcccgcctccccccatccacctcctttcatcacatccagtaccag
agctaa

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