Pseudochaenichthys georgianus (South Georgia icefish): 117451533
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Entry
117451533 CDS
T09629
Symbol
ppfia3
Name
(RefSeq) liprin-alpha-3 isoform X1
KO
K26226
liprin-alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117451533 (ppfia3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117451533 (ppfia3)
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117451533 (ppfia3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Tc-38
Motif
Other DBs
NCBI-GeneID:
117451533
NCBI-ProteinID:
XP_033945778
LinkDB
All DBs
Position
8:17939115..17964325
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AA seq
1238 aa
AA seq
DB search
MMCEVMPTISEDGRGGGGDSSSPGGGGGVGGIGGYGNRDSRGSGSGVGVTDEGGSTGNLE
SLMVNMLTERERLIDSLRETQDSLGTAHLRLRDLGHEKESLQRQLSIALPQEFAVLTKEL
NLCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQSQSPAGVSSE
VEVLKALKSLFEHHKALDEKVRERLRVALERVASLEEELQSSSQEVLSLREQIKRRTQGI
ENGKERLPNGPSTILDEADVDRQREGEIERQRSELGQLKERLALMCRQVGEIEEQLTSAR
RELARSEEANQKLQRDVKEALCQREDMEERITTLERRYLSAQREATSLHDTKDKLENELA
SKDSLYRQGEEKNRQLQERLDDAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEERHGN
FEERLRQMEAQLEEKNQELQRARQRERMNDEHNKRLSDTVDKLLSESNERLQLHLKERMA
ALEEKNALSEELSNMKKLQDDLLANKDQLIAELERLQLELDQLRARPGGSYSSRSLPGSA
LELRYSHGSGSLPTGSTSHLDHFGNASTGGVVRRSHRARWSSAREDSTKNYSSTLCVQYP
EWESGALLGTGFEPGLDVGCSDDEDDGDPRFGSELMSPSGQTDVQTLAIMLQEQLEAINK
EIKMIQEEKENTELRAEEIESRVTALDSPPIPPSTLGRDSTGRGFIPTSITSSTLASPSP
PSSGHSTPRLPHSPARENDRQNSKDEDRSLALLDSTPPSTPRALRLDRMTLTHPGAMLDD
PREFRSLSADGSSSNSSQDSLHKSSKKKSIKSSIGRLFGKKEKGRMGQPGREGSSSLAST
PSEDSGDAMGISKTGTLGPADKDRRSKKKHELLEEACRQGLPFASWDGPTVVSWLELWVG
MPAWYVAACRSNVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPAS
TRSSTSNVWMTHAEMETLNAATKPQELKEFSWDQILAYGDMNHEWVGNDWLPSLGLPQYR
SYFMESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERRREES
VHQNKDVMVWSNERVMCWVQNIGLKEYGDNLRESGIHGALLALDDTFDFTDLALLLQIPN
QSTQARQLLEQEYNSLLAMGTERRPDEDGVKTFSRSPSWRKMFRETDLRGVTSDSAETLP
ANFRASAISTPSVTLRKVQSDASPAARGESASVRTYSC
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatctccgaggacgggcgcggaggaggaggcgactcg
tcttcccctggggggggcggaggtgttggaggcatagggggctacggtaacagggattcc
cgcggcagtggtagtggggtcggcgtcactgatgaggggggcagcaccggcaacctggag
tctctgatggtgaacatgctgacggagagggagcggctgattgacagcctgagggagacc
caggacagtctggggaccgcccacctccgcctgcgagacctgggccacgagaaggagtcg
ctccaaaggcagctgtccatcgccctgccacaggagtttgcagtgctgaccaaagagctg
aacctctgcagggagcagctgctggagcgagaggaggagatcgcagagctgaaggcggag
aggaacaacacacggctgctgctcgaacatctggagtgcctggtgtcccgtcacgagcgc
agcctgaggatgacggtggtgaagaggcagtcccaatctccagccggggtctccagtgag
gtggaggtcctaaaagcactcaaatccctatttgagcaccacaaagctctggatgagaag
gtgagggagagactacgggtggctctggagcgagtggcgtcgctggaggaagagctgcag
tcctcctctcaagaggttctgtctttaagggaacaaatcaagcgacggacgcaaggaata
gaaaatggcaaagagcggcttcccaacggaccgtcgaccatcttggatgaagcagacgtg
gacaggcagcgagagggcgagatagagcggcagaggtcagagctgggtcaactgaaagag
aggctggctctcatgtgcagacaggtcggggagattgaggaacagctgacgtccgccagg
agggagctggcccgatcggaggaggccaaccagaaactacagagggacgtgaaagaggca
ctctgtcaaagggaagacatggaagagagaatcaccacattagaacgcaggtacctgagc
gcccagagggaggcgacgtctctccacgacacgaaagataaactggagaatgagttggcc
agcaaagactctctgtacagacagggcgaggagaagaaccggcagcttcaggagcgtctg
gatgatgccaaacagaagctgcagcaaaccctgcagagagccgagacgctgccagagatc
gaggcccagctcgcacagagagtggcagcactcaacaaggcggaggagcgtcatggtaac
tttgaggagcgactgcgacagatggaggcgcaactggaggagaagaaccaggagctacag
agggcgaggcagagggagaggatgaacgatgaacacaacaagcgtctctccgacacagtg
gacaagctgctgtctgagtccaacgagaggctgcagctccatctgaaggagaggatggcg
gctctggaagaaaagaacgccctgtctgaagaactatccaacatgaagaaactccaggat
gatctcttagcaaacaaggatcagctgatagcggagctggagcggctgcagctggagtta
gaccagctgagagcgaggcccgggggctcttattccagccgctccctgccaggtagcgct
ctggagttgcggtattcccacgggagtgggtcgctcccaacaggctccacctctcacctg
gatcactttggtaacgcctccactgggggggtggtaaggcgaagtcatcgggctcgctgg
agctcggctagagaggactctaccaagaactacagttcaactctctgtgtgcagtaccca
gaatgggagagcggggctctgctggggaccgggtttgagccagggttagatgtgggctgc
tcagacgacgaggacgacggggaccctcgctttggctccgagctgatgtcccccagcgga
cagacggacgtgcagaccctggccatcatgctgcaggaacagctggaggccatcaataag
gagatcaaaatgatccaggaggagaaggagaacactgagttgcgggccgaagagatcgag
agccgggtcacagctttggacagcccccccattcctccatccaccctgggaagagacagt
acaggacggggcttcattcccacgtccatcacctcctccaccctggcctctccctccccc
ccgagctctggacactccacccctcgccttcctcactccccggcccgagagaatgacaga
caaaacagcaaagatgaggaccggtccctggctcttctcgactctacgcctccttccacc
ccccgtgcactgcgactggacagaatgacgctcacccacccaggggcgatgctcgatgac
ccccgggagtttcgcagtctctccgcagatggcagcagctccaacagcagccaagactct
ctgcacaagtccagtaagaagaaaagcatcaagtcttccatcggtcggctatttgggaag
aaggaaaaaggaaggatgggccaaccagggcgggagggttcttcttctcttgcatcgaca
ccctctgaagactctggagacgcaatgggcataagcaagactgggactctgggtccagca
gataaagaccgccgcagcaagaagaagcatgagctactggaagaggcatgtcgccaagga
cttccctttgcatcatgggacgggcccactgttgtatcttggttggagctgtgggtgggg
atgccggcctggtacgtcgcagcctgtcgctccaacgtgaagagcggcgccatcatggcc
aacctgtcggatacagagatccagcgggagatcggcatcagtaacccgcttcaccgcctc
aaactgcggctggccatccaggagatggtctccctcaccagcccctcggcccctgccagc
actcgctcttcgaccagtaacgtgtggatgacccacgcagagatggagaccctgaacgca
gccaccaagcctcaggagctcaaagagttcagctgggatcagatccttgcctatggcgat
atgaatcatgagtgggtgggcaacgactggctgcccagcctgggcctgccacagtaccga
agctatttcatggagtccctggtggatgctcgcatgttggaccacctgaccaagaaggag
ctgagaggacagctcaaaatggtggacagcttccacagggtcagtttgcattacggcatc
atgtgcctgaagcgtctgaactacgatcgcaaggagctggagaggaggagggaggagagc
gtccaccagaacaaagatgtgatggtgtggtccaatgagcgcgtgatgtgctgggtgcag
aacatcggtctgaaggagtacggcgacaacctgcgtgagagcggcatccatggggctctg
ctggctttagacgacaccttcgacttcactgacctggccctgctgctgcagattcccaac
cagagcacacaggcccgacagctcctggagcaagagtacaactcgctcctcgccatggga
accgaaagacgacctgatgaggatggagtgaagacgttcagccgctcgccctcctggagg
aagatgtttagagagacagaccttcggggcgtgacctccgactccgctgagaccctgcct
gctaacttccgtgcctcagccatttccacgccctccgtcaccctgagaaaggttcagagt
gatgccagccctgctgcccggggggaatctgcctcagtgaggacgtactcctgttga
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