Pseudochaenichthys georgianus (South Georgia icefish): 117451659
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Entry
117451659 CDS
T09629
Name
(RefSeq) TANK-binding kinase 1-binding protein 1-like
KO
K12652
TANK-binding kinase 1-binding protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117451659
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Gene cluster
GFIT
Motif
Pfam:
TBD
Zn-C2H2_12
TACC_C
Cnn_1N
Lysozyme_like
Rad50_zn_hook
Fib_alpha
BRE1
DUF7337
NET2A_C
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
117451659
NCBI-ProteinID:
XP_033945954
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All DBs
Position
8:3335226..3401622
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AA seq
663 aa
AA seq
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MSGSSHVDPPQHHHLHGCSTETQLMMDLFRRGELGLLGGGEGLRDDVGIPGISWSANRMP
EDMYPASGLALAAAYHDIKTRLASLERENSSIKRKLKHYEVKFPIISEFGEERLLCCSCD
PLINDTSVIQSETTNLQQRINSLTQELQKSKEREERLEEVIQAYEKIHLEKSNVQRDLDK
MTSLAEQHVEQICGLESALRQRETSLQKLSVQLRSKDAHKSHLQLHASLDVPREGRGGPL
QSSRSLDALSDLKLQRLEAELEGARHREEGACHREGELRAELKRLQKEVAKLQEAQRQVQ
EPPPHCEHCDVEWIKKAGDEQVNLALAYTELTEELGRVRSLAVKQSDLLRNVSQEPLNRP
SPAPQRLSPTSPQRPSLSPDRLHPTPSPPHSPTDGPASYSHQPTCSRLRSKFQGRRSYSE
VSDPSGLRRPLAWLMRDPVSTLPKPRTLLGEKQSYGQNKPQLRTSFGGLVRPASAHGPGG
ERGGERGGERGGERGGGGSLSSSPHHCPLDLGFPLAAEVHHFCRHDNPPEPTPLVTPPQS
SDDEEDVCTYLSPAASPPRTLGAIGIGSLSPREQPLHPSFSYPRKQPRHPSFSSPEGPST
LSCHLPPYMNTEHAQSWPSINLWMESEESAARSCPLCQLTFPTGYPDDALIKHIDSHLEN
SKI
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctccagtcatgtcgaccctcctcagcaccatcatctccatggctgttctaca
gagacccaactgatgatggatctattccgcagaggagagctggggctgctgggaggagga
gagggtctgagggatgacgtgggcattcccggcatcagctggtcagccaatcggatgcca
gaggacatgtacccggcatcaggattggccctggctgccgcctatcatgatatcaaaacc
cggctggccagtctggagagggagaacagcagcatcaagaggaagctcaaacactacgag
gtcaagtttcctataatcagtgagtttggggaggagaggttactgtgctgttcctgtgat
cccctcatcaacgacaccagtgtgatccaatcagagaccaccaacctgcagcagaggatc
aactctctcactcaggagctccagaagagtaaggaaagagaggagagattggaggaagtc
atccaggcttatgagaagattcacctggagaagagcaacgtccagagggacctggacaag
atgacctctctggcagagcagcacgtggagcagatctgcggtctggagtcggctctcaga
cagagagaaacatctctgcagaagctcagcgttcaactccgcagcaaagacgcacacaag
tctcatctgcagctgcacgccagcctggacgttccccgagagggccggggggggccgctg
cagagctcccgcagcctggacgctctgtccgacctgaagctgcagcgcctggaggccgag
ctggagggggcccggcaccgggaggagggggcctgccaccgggagggggagctgagggcc
gagctcaagaggctgcagaaggaggtcgcaaagctgcaggaagcacagagacaggtgcag
gagccccccccacactgtgagcactgcgacgtagagtggataaagaaggccggggacgaa
caggttaacctagcattagcctacacagagctaacggaagagttgggtcgtgttcgcagt
ctggctgtgaaacagagcgaccttctgcggaacgtctcacaggagcctctcaaccgtcct
tccccagcccctcagcgtctctcccccacctccccccagcgcccctcactctcccctgac
cggctccaccccaccccctcccctcctcactccccaaccgacggccccgcctcctactcc
catcagccaacctgcagccgtctacggtccaagttccagggccgacgcagttattctgag
gtatctgacccctcaggcctccgccggcccctggcttggctgatgagggatccggtgtca
acactccccaagcccaggaccctcctgggggagaagcagagctatggacaaaacaaaccc
cagcttcgtacctcatttgggggcctggtcagaccggcgtcggctcacggacctggaggg
gagaggggaggagagaggggaggagagaggggaggagagaggggagggggaggcagtctg
agcagcagtcctcatcactgtcctctggacctgggcttccctctggctgctgaggtacat
cacttctgtcgccatgataacccccccgagcccaccccactggtgacccccccacagtcc
tctgatgatgaagaggacgtctgtacgtatctgtctccggctgccagcccgcctcggacg
ctcggcgccattgggattggctcattgtcaccgagggaacagcccctacacccctcattc
tcatatcctaggaaacagccccgccacccctccttctcgtcccctgagggcccctccacc
ctctcctgccatctgcctccctacatgaacactgagcatgctcagtcgtggccctccatt
aacttatggatggagtcagaggagagtgctgctcggagctgtcccctgtgtcagctgacc
ttccccaccggttaccctgacgacgccctcatcaaacacatcgactcccacctggagaac
agcaagatctga
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