Pseudochaenichthys georgianus (South Georgia icefish): 117451746
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Entry
117451746 CDS
T09629
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04120
Ubiquitin mediated proteolysis
pgeo04137
Mitophagy - animal
pgeo04144
Endocytosis
pgeo04340
Hedgehog signaling pathway
pgeo04350
TGF-beta signaling pathway
pgeo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117451746
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117451746
04350 TGF-beta signaling pathway
117451746
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117451746
04137 Mitophagy - animal
117451746
09144 Cellular community - eukaryotes
04520 Adherens junction
117451746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117451746
04121 Ubiquitin system [BR:
pgeo04121
]
117451746
03029 Mitochondrial biogenesis [BR:
pgeo03029
]
117451746
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117451746
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117451746
Autophagy
Mitophagy
Other mitophagy associated proteins
117451746
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
HECT type E3
117451746
Mitochondrial biogenesis [BR:
pgeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117451746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WW
HECT
Motif
Other DBs
NCBI-GeneID:
117451746
NCBI-ProteinID:
XP_033946019
LinkDB
All DBs
Position
8:33521968..33568121
Genome browser
AA seq
535 aa
AA seq
DB search
MTDERLNLNELTLRITSSHPPSGKSLNFPTFLFLFLFLLLLHVQTVSRNVSVKRRLRGIL
YGELYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKLSPS
DSDTVRGQIVVSLQSRDRISSGGPVVDCSQLFDNDLPDGWEERRTASGRIQYLNHITRTT
QWERPTRPASEYSSPGRPLSCIVDENTPVTTNGATPTTIPQPINGEQRAQERRVRSQRHR
NYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELGPL
PPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPSPNGSRGAIESQNVSRQ
NHLKDQVQQVPVSPAQLPEENECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVSR
EEIFEESYRQVMKMRPKDLWKRLMVKFRAEEGLDYGGVAREWLYLLSHEMLNPYYGLFQY
SRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgagcgtttaaacctcaatgaactgacgctcaggatcacaagttcacatcca
ccgtctggaaaatccctcaacttccccaccttcctcttcctcttcctcttcctcctcctc
ctccatgtccaaactgtgtctcgtaatgtgtccgtgaaaaggcgtctccgtggtatcctc
tacggggagttatacatcggaaaatcagattccatcaccatcagcgtgtggaaccacaag
aagatccacaagaagcaaggagccgggttcctgggctgcgtccgcctgctgtccaacgcc
atcaaccgcctcaaagacacgggctatcagagactagacctgaacaagctgagtcccagc
gacagcgacacggtcagagggcagatagtggtcagcctgcagtccagggaccggatcagc
tccggcggcccggtggtggactgcagccagctgttcgacaacgatctcccagatggctgg
gaggagaggaggacggcgtcagggaggatccagtatctgaaccacatcacacgcaccacg
cagtgggagaggcccaccaggccggcgtcagagtactcgagccccggccggcctctcagc
tgcatcgtggatgaaaacacgccggtcaccaccaacggggcgacgcccaccacgatcccg
cagccaatcaacggggagcagcgagcccaggagaggcgggtccgatctcagaggcaccgc
aactacatgagcagaacccacctgcacaccccccccgacctccccgagggatacgagcag
aggaccacgcagcagggtcaggtgtacttcctgcacacgcagacgggcgtcagcacgtgg
cacgacccccgagtcccacgagacctgagtaatgtgaactgtgaggagctgggtcctctc
cctcctggatgggagatacgaaacacagccacggggagggtctactttgtcgaccacaac
aaccgaaccacgcagttcactgacccgcgcctctccgccaacctgcacctagtcctaaat
ccgagcccgagccccaacggttctcgaggggccatcgagagtcagaatgtcagtcgtcag
aaccacctgaaggaccaggtccagcaggttccggtgtcgcccgcccagctgcccgaggag
aacgagtgcctcacggtgcccaagtacaagagagacctggtccagaagctgaagatcctg
cggcaggagctgtcccagcagcagccgcaggccggacactgccgcatcgaggtgtcccgc
gaggagatctttgaggagtcgtatcgccaggtgatgaagatgaggccgaaggacttgtgg
aaaaggctaatggtgaagttcagagcagaggaggggctggattacggaggagtggccagg
gagtggctgtacctgctgtctcacgagatgctgaacccgtactacggactcttccagtat
tcacgagatgacatctacactctgcagatcaaccccgactccgccgtcaaccccgagcat
ctgtcgtacttccacttcgtggggcggatcatgggcatggcggtgtttcacggtcactac
atcgacgggggcttcacgctgccgttctacaaacagctgctgggg
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