Pseudochaenichthys georgianus (South Georgia icefish): 117451772
Help
Entry
117451772 CDS
T09629
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03030
DNA replication
pgeo03410
Base excision repair
pgeo03420
Nucleotide excision repair
pgeo03430
Mismatch repair
pgeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117451772 (pold1)
03410 Base excision repair
117451772 (pold1)
03420 Nucleotide excision repair
117451772 (pold1)
03430 Mismatch repair
117451772 (pold1)
03440 Homologous recombination
117451772 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgeo03032
]
117451772 (pold1)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117451772 (pold1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117451772 (pold1)
DNA replication proteins [BR:
pgeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
117451772 (pold1)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
117451772 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
117451772 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
117451772
NCBI-ProteinID:
XP_033946048
LinkDB
All DBs
Position
8:complement(26969905..26983398)
Genome browser
AA seq
1105 aa
AA seq
DB search
MDSKRRNGGSKFGGASQAKRGKPAGEWEDSPSQFEEELSMFEEAEMESEEMEGKAGHDVI
PVGDLFSADLNPRWRRPIAASLDPSSESLVFQQIDLDYYLGATVAGMPGQSQGKVPIIRM
FGVTDSGNSVCCHVHGFAPYFYVPAPAGFKSDFLGEFKRELNSVVLKDMRSNKDNISVTV
LAVDITRKESMYGYHGKRILDFLRITMAMPRLIAPAKRLLEQGFKYGPFPIQCYQSYEAN
IDFEIRFMVDCDVVGCCWIELPKSKFRVREEKLVGGTDSRYPGKESLCQYEVDVGWTDLI
SHPTEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGESEPFIRTVFT
LQSCASIVGSQILCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLINRAATLKVN
FFPYLGRVRGIKSVMRDLNFQSKQMGRRENKIINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEVGEDYTGATVIEPEKGYYSI
PIATLDFSSLYPSIMMAHNLCYTTLLQKGSGEQLSLAPENFIKTPTGDMFVKSSVRKGLL
PEILENLLAARKKAKTELKNETDPFKRQVLDGRQLALKISANSVYGFTGAQIGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYTISNGYQGDAKVIYGDTDSVMVKLGVATVQEAMNIGR
EAAEWVSTHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSGSADTHEKMDCKGIETVRRDN
CPLVANLINTCLQKCLIDRDPQGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKATKGVAAYMKSEDPIFVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAENILLKGDHTRCKTVLTSKIGGLMAFAQKRSTCIGCK
AVLKSDAAVCDFCKKKESELYQKEIFHLSTLEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSNLVNRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggattctaaaagacgcaatggtggctctaaatttggcggtgcgtcccaggccaaacgg
gggaaacctgctggtgaatgggaggacagtccatcgcagtttgaagaggagttgtccatg
tttgaagaagcagagatggagtcagaggagatggaggggaaagcagggcatgatgttatt
cccgtaggtgacctcttctcagcagacctgaaccctcgttggcggcggcctattgccgct
tccctggacccgtcatcagaaagtttggtgtttcagcagattgatctcgactattattta
ggagcgacggtggcaggcatgcccggccagtctcagggaaaagtcccgatcattcgaatg
tttggggtgacagacagtggcaacagtgtgtgctgccatgtccacggttttgcgccttac
ttctatgttcctgcaccagctgggttcaaatcggacttcctgggtgaatttaaaagagag
ttgaactctgttgtcctgaaggacatgcgttccaataaggacaacatatccgtcacagtg
ttggctgtggacatcacccgcaaagagagcatgtacggttaccatgggaaacgcattttg
gattttttgcggattaccatggcgatgccacgtctcatcgccccagctaagaggctgctg
gagcagggcttcaagtacggacctttccccatccagtgctaccaatcctatgaggccaac
atcgattttgagataaggtttatggtggactgtgacgtggtgggatgctgctggattgaa
cttcccaaaagcaagttcagagtgcgtgaagagaagctcgtggggggaacagattctagg
tacccaggcaaggagagcctgtgtcagtacgaggtggatgtgggatggacagatctgata
agtcaccctacagagggagactggcagaggatcgctccgctcagggtgctcagcttcgac
atcgagtgtgcaggaagaaaaggaatcttcccagaggcagacaaagaccctgtgattcag
atagcctctatggtgcagcgtcagggtgagtcggagcccttcatccgcaccgtgttcacg
ctccagtcctgtgccagcatcgtgggctctcagattttgtgcttcacacaggagaaacag
ctactgcagagctgggccgagtttttgaggacagtggacccagacatcatcaccggatac
aacatccagaactttgactttccctacttgatcaacagagcagctactttaaaggtgaat
ttctttccctacctcggccgggtgcgaggcatcaagtcagtcatgcgagacttaaacttc
cagagcaagcagatgggccgcagagagaacaagatcattaacatggagggccgagttcag
tttgatctgctgcaggttcttctcagggattataaactgcgctcctacacactgaacgct
gtgagtttccacttcctacaagaacagaaagaggatgtgcagcactccatcatcactgat
ctgcagaatggcaacgagcagactcgtcgccgtctagccgtctactgcctgaaagacgcc
tacctcccgctgcgcctgctgcagaagctgatgtgtgtgattaactacatggagatggcc
agagtgacgggcgttcctctcacctacctgctctccagagggcagcagatcaaggtcgtc
tctcagctgctgcgacaggccatgaagcaggacctggtcatgcctgttgtgaagacagaa
gtaggagaagactacactggagcgactgtcattgagccggagaaagggtattacagcatc
cccattgctacgctggatttctcctccctgtatccgtccatcatgatggctcacaatctg
tgctacaccaccctgctgcagaaaggctcaggggaacaactgagcctcgctccagagaac
ttcatcaagactcccactggggacatgtttgtgaaaagctctgtgaggaaaggactcctg
cctgagatcctggagaacctgctggctgccaggaagaaggccaaaacggagctaaagaat
gagacggaccccttcaagaggcaggtgctggacggccggcagctggctctcaaaatcagt
gcaaactccgtgtacggcttcacgggggctcagatcggcaagctgccctgcctggagatc
tcccagagcgtcacagggtttggaagacagatgatcgagcaaaccaaacagctagtggag
tccaagtacaccatttccaatggttaccaaggtgatgccaaggttatttatggggacaca
gactccgtcatggttaagctcggagttgccacggtgcaggaggccatgaacatcgggagg
gaggcggcagagtgggtgtcgactcatttcacacctcccatcaaactggagtttgagaag
gtgtactacccatacctgctgatcaacaagaagcgctacgcaggcctgtatttctccgga
agtgcagacactcatgaaaagatggactgtaaaggcattgaaacggtccgcagagacaac
tgccctctggtggctaacctcatcaacacctgtctgcagaaatgcctcatagacagggat
cctcagggtgccgtggctcacgctaaagaagtgatctcagacctgctgtgcaaccgcatc
gacatcagccagctggtcatcaccaaggagctgacgcgcacggcgcaggagtacgccggc
aaacaggcgcacgtagagctggccgagaggatgaggaaaagagacgccggcagcgccccg
aacctgggggaccgagtgccgtacgtcatcatcaaggctacaaagggagtggcagcgtac
atgaagtcagaggacccgatcttcgtgctggagaacaacattcccatcgacacacaatac
tacctggagcagcagctgtccaaacccctgctgagaatatttgagcccatcctgggagag
agcaaggccgagaacatcttgctcaagggcgaccacacgcgctgtaagacggtgttgacc
tcaaagatcgggggcctcatggccttcgctcagaagaggagcacctgcatcggctgcaaa
gccgtgctcaaaagcgacgccgctgtgtgcgatttctgtaagaagaaggagtctgagctg
taccaaaaagagatcttccacctgagcactctggaggagcgtttctcccgcctgtggact
cagtgccagcggtgccagggctccctccacgaggatgtgctctgtaccagtcgggattgt
cccatcttttacatgaggaagaaggtccagaaagatttggatgaccagagcaatctggtg
aatcgcttcggatggtga
DBGET
integrated database retrieval system
