Pseudochaenichthys georgianus (South Georgia icefish): 117451888
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Entry
117451888 CDS
T09629
Symbol
sv2ca
Name
(RefSeq) synaptic vesicle glycoprotein 2Ca
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117451888 (sv2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117451888 (sv2ca)
Transporters [BR:
pgeo02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
117451888 (sv2ca)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
MFS_2
Pentapeptide_4
Pentapeptide
Pentapeptide_3
Motif
Other DBs
NCBI-GeneID:
117451888
NCBI-ProteinID:
XP_033946141
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Position
9:complement(36385267..36423199)
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AA seq
732 aa
AA seq
DB search
MEETYNNRTSLSKGAKDIVKEAKRHAKKKVNKVVDRATDGYSSHHNYSRFEDDEDEDEDF
YRNPPRQGGEGNHDNEEGSSDATEGHDDEDEIYEGEYQGIPSDRKQKEGQVALGQPMSDA
SRDRKGLEEERQADEEELAQQYELIIQECGHGRFQWQLFLVLGLALMSDGVEVFVVGFVL
PSAETDMCVPNSSSGWLGSVVYLGMMVGAFFWGGMSDKVGRRQCLLICMSTNGFFAFLSS
FVQGYGLFLVCRVFAGFGIGGAVPIVFSFFSEVLSREKRGEHLSWLCMFWMIGEIYASAM
AWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPRFYLEVGKHDEA
WMILKQIHDTNMRARGQPEKVFTVNRIKIPKQLDELVEMESESRNRVSKCFFRIKTEIHG
IYLNLMKCFNYPMKENMTRLAIVWFTLSFGYYGLSVWFPDVIKHLQADDYASKVKIHSDE
RIEDFTFNFTLENQIHKNGLFINDRFINMKLRSVTFIDSTFRNCYFDDVKSVGSFFRNCT
FIDTFFYNTDIDESKLIDGTEVVNSTFTHNKKGCQMTFDDDYSAYWVYFINFLGTLAVLP
GNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISAWNSLD
VVTTESFPTSRRGTGFGFCNALCKLAAVLGNLIFGSLVGITKSIPILMASSVLVGGGLVA
LRLPDTKSNVLM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacttacaataacaggacttccctgtctaagggggccaaggacattgtcaag
gaggccaagcggcatgcaaaaaagaaagtcaacaaggtggtggaccgcgccacagacggg
tactcgtcccaccacaactacagccgattcgaggacgacgaggacgaagatgaggatttc
taccggaacccgccgaggcagggcggagagggcaaccatgacaacgaggagggctccagc
gatgctacagagggccacgatgacgaggatgagatctacgagggcgagtaccaggggatc
ccctcggataggaagcagaaggagggccaggtggcactgggacaacccatgtctgacgcc
tcaagggaccgcaagggtctggaggaggagaggcaggcggatgaggaggagctggcccaa
caatacgagctgatcatccaggagtgcggccacgggaggttccagtggcagctgttcctg
gtgctcgggctggcgctcatgtcagacggggtggaggtgttcgtggtgggctttgtgctg
cccagcgcagagacagacatgtgtgtgcccaactccagctcgggatggctaggcagtgtg
gtttacctggggatgatggttggagcgttcttctggggaggaatgtctgacaaagtgggc
cgcagacagtgcctcctcatctgcatgtccaccaacggcttcttcgccttcctgtcctct
tttgtccagggatacggcttgttccttgtttgtcgtgtctttgcaggctttgggatagga
ggtgctgtgcccatcgttttctccttcttttcagaggtgttgtccagggagaaaagagga
gagcacctcagctggttgtgtatgttctggatgatcggagagatatatgcctccgctatg
gcctgggccatcataccacactatggttggagtttcagcatgggttcggcgtatcagttt
cacagctggcgggtgtttgtggtcgtctgtgctctgccctgtgtgtgtgcggtggtcgct
cttaccttcatgcccgaaagtcccaggttctaccttgaggtggggaagcatgatgaagcc
tggatgatcctcaaacagatccacgacaccaacatgagagcgcgtgggcaaccggagaaa
gtcttcactgtaaacaggatcaaaatacccaaacagctggatgaattggtggaaatggag
tcagagtctcgcaaccgagtttccaagtgtttctttaggataaagactgaaatacacggg
atctatctgaatctcatgaagtgcttcaactaccctatgaaagaaaacatgacgcgactg
gccatagtgtggttcacgctgtcattcgggtattatggtctgtcagtctggttccctgat
gtcatcaaacaccttcaggcagatgattatgcctccaaagtgaagatacacagcgatgaa
cggattgaagacttcaccttcaacttcactctggagaaccagatacacaaaaacggactc
tttatcaacgaccgattcatcaatatgaagctgaggtctgtcacattcattgactctacc
tttcgtaactgctactttgatgatgtgaaatctgtgggctccttcttccgtaactgcact
ttcattgatactttcttctacaacactgacattgatgaaagcaagttgatagatggcaca
gaggtagtcaacagcacgttcactcacaacaagaaaggatgccagatgacatttgatgat
gactacagtgcctactgggtttacttcatcaacttcctcgggacgctggctgttctgccc
ggcaacatcgtgtccgcgcttctcatggacaaaattggccgtctgtccatgttaggtggc
tccatggtgctttcgggtatcagctgtttctttttgtggttcggcaccagtgagtccatg
atgatttttatgttgtgcctttacaacggcctgagcatctctgcctggaactccctggat
gtcgtcaccactgagtcattcccgactagcaggagaggaacaggctttgggttctgcaac
gctctctgcaagctggctgcagtcttgggaaacctgattttcggttctcttgttggcatc
acaaagtccatccccatcctcatggcctcgtctgtgctcgtcgggggaggcctggttgca
ctccggctgcctgacaccaagtcgaatgtcctcatgtaa
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