Pseudochaenichthys georgianus (South Georgia icefish): 117451897
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Entry
117451897 CDS
T09629
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 2-like isoform X1
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04020
Calcium signaling pathway
pgeo04148
Efferocytosis
pgeo04260
Cardiac muscle contraction
pgeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117451897
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117451897
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117451897
04261 Adrenergic signaling in cardiomyocytes
117451897
Enzymes [BR:
pgeo01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
117451897
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
Motif
Other DBs
NCBI-GeneID:
117451897
NCBI-ProteinID:
XP_033946150
LinkDB
All DBs
Position
9:complement(45026266..45075230)
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AA seq
1042 aa
AA seq
DB search
MENSHTKSVEEVYSHFCVNESTGLSLDEVKRLRDKWGLNELPAEEGKSLMELVLEQFEDL
LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAEDAIEALK
EYEPEMGKVYRQDRKTVQRIKARDIVPGDIVEIAVGDKVPADIRICSIISTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMMFSGTNIAAGKAVGVAVATGVNTEIGKIRDEMA
ATEQEKTPLQQKLDEFGEQLSKVISLICIAVWLINIGHFNDPVHGGSWIRGAVYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRMFVVNKVAGDSCDLSEFTITGSTYAPEGQVFHNDKPVKSSQYDALVELATICALC
NDSSLDFNETKGVYEKVGESTETALTCLVEKMNAFDTEVHNLTKIDRAMACNSVIKQLMK
KEFTLEFSRDRKSMSVYCTPNKSRSSMGKMFVKGAPEGVIERCTHVRVGNSKVPLTKGIK
DQILATIRDYGTGRDTLRCLALATRDTPPRVEDMNLTETVKFAQYESDLTFVGCVGMLDP
PRLEVAASIKLCRQAGIRVIMITGDNKGTAVAICRRIGIFGEDDDVEALAFTGREFDELS
PAEQVDAVTNARCFARVEPSHKSKIVEILQGMDEITAMTGDGVNDAPALKKAEIGIAMGS
GTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG
FPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRNAKEALISGWLFFRYLAIGC
YVGAATVGAAAWWFVLSEDGPQVSLYQLSHFLQCAADNPDFEGLECEVFESPYPMTMALS
VLVTIEMCNALNSLSENQSLLRMPPWENVWLLGAICLSMSLHFLILYVEPLPVIFQITPL
DTTQWMMVLKISLPVILLDEVLKFVARNFLDFGNERTEKPTPRSGCSLACLEGISWSFVF
VSLPLVLWIYSFDTNVTAMLWP
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggagaactctcacaccaagagcgtggaagaagtttacagtcatttctgcgtcaatgag
agcacaggactttccctggacgaggtgaagcgactcagggacaaatggggcctaaacgag
ttaccagcagaagaagggaaatctttgatggagcttgtccttgaacaatttgaagattta
ttggttcgaattcttctgctggccgcgtgtatatcttttgtgctggcgtggttcgaggag
ggcgaggaaacgatcactgccttcgtggagccgtttgtgattttactgattcttatcgcc
aacgccatcgtcggggtgtggcaggaacgtaacgctgaggatgccatcgaggcgctgaag
gagtacgagccggagatggggaaagtgtaccgtcaggacaggaagacggtgcagaggatc
aaagctcgggacatcgtgcccggagacatcgtggagatcgcagttggagacaaggttccc
gctgacatccggatctgttccatcatatccacgaccctgagggtcgaccagtccatcctc
accggtgagtccgtgtccgtcatcaaacacacggaccccgtgccggacccccgagccgtc
aaccaggacaagaagaacatgatgttctccggcaccaacatcgcggctgggaaggcggtc
ggcgtcgccgtggctacgggcgtgaacacggagatcgggaagatccgtgacgagatggcg
gcgacggagcaggagaagacgccgctgcagcagaaactggacgagttcggggagcagctc
tccaaagtcatctctctgatctgcatcgccgtgtggctgatcaacatcggacacttcaac
gacccggtgcacggcggctcctggatccgaggcgccgtttattacttcaagatcgccgtg
gcgttggccgtggccgccattcccgaaggtttgcccgccgtcatcaccacctgcctggcg
ttagggacgcgccgcatggccaagaagaacgccatcgtcaggagcctgccctccgtggag
acgctcgggtgcacctcggtcatctgctccgacaaaacagggacgctcaccaccaaccag
atgtccgtgtgcaggatgttcgttgtgaacaaagttgcaggagacagctgtgatctgtca
gagttcaccatcacagggtctacgtacgctccagagggacaagtgttccataatgacaaa
ccagtgaagtcctcccagtacgacgctctggttgaactggccaccatctgcgctctgtgc
aacgactcctcgctggacttcaacgagacgaagggtgtgtatgagaaggtgggcgagtcc
acggagacggcgctcacctgtttggtggagaagatgaacgccttcgacaccgaagtccac
aacctgacgaagatcgacagagccatggcctgcaactccgtgatcaagcagctgatgaag
aaggagttcacactggagttctccagagacaggaagtccatgtccgtgtactgcaccccc
aacaagtcccgctcctccatgggcaagatgttcgtcaagggcgccccagagggagtgata
gagaggtgcacgcacgtcagagtgggaaacagcaaagtgccgctgactaaaggcatcaag
gatcagatcctggcgacgatcagagactacgggacggggcgcgacacgctgcgctgcctc
gccctcgccaccagggacacccccccacgggtggaggacatgaacctcaccgagaccgtc
aagttcgcccagtacgagtccgacctgaccttcgtgggctgcgtgggcatgctggacccc
ccccgactggaagtggccgcgtccatcaagctgtgccggcaggcggggatccgcgtcatc
atgatcaccggagacaacaagggcaccgccgtcgccatctgccgccgcatcggcatcttc
ggggaggacgacgacgtggaggcgttggcgttcaccgggcgcgagtttgacgagctgtcg
ccggccgagcaggtcgacgccgtcaccaacgctcgatgcttcgctcgcgtagagccgtcg
cacaagagcaagatcgtggagatcctgcagggcatggacgaaatcaccgccatgacgggc
gatggagtgaacgacgctccggctctgaagaaggcggagatcgggatcgcgatgggttca
gggaccgccgtcgccaagtcggcctcagagatggttctcgccgacgacaacttctcgtcc
atcgtggcggccgtggaggagggccgagcgatttataacaacatgaagcagttcatcaga
tacctcatctcctccaacgtgggcgaggtcgtctgcatcttcctgacggcggcgctgggc
ttccccgaggctctgatccccgtgcagctgctctgggtgaacctggtgacggacggcctg
ccagccaccgcactgggcttcaacccccccgacctggacatcatggagaagcccccccgc
aacgccaaggaggcgctcatctccggatggctcttcttcagatacctcgccatcggatgt
tatgtgggagcagccacagttggagcggctgcctggtggttcgtcctctctgaagacgga
ccacaggtctctctgtaccagctgagccacttcctgcagtgtgcggctgataacccggac
tttgagggtctggagtgtgaagtgttcgagtctccgtacccgatgaccatggctctgtcc
gtgctcgtcaccatcgagatgtgcaacgctctcaacagtctgtcggagaaccagtctctg
ctcaggatgcctccctgggagaacgtctggctgctgggggccatctgcctctccatgtcc
ctgcacttcctcatcctctacgtggagccacttcctgtcatcttccagatcacgcctctg
gacaccacccagtggatgatggtgctgaagatctctctccccgtcatcctattggacgag
gtgttgaagttcgttgccaggaattttctggacttcggtaacgagcgcacggagaagcca
accccccgctccggctgctccctcgcatgtttggaggggatctcgtggtcttttgtgttc
gtgtctctgccgctggttctgtggatctacagcttcgacactaacgtgaccgccatgctg
tggccctga
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