Pseudochaenichthys georgianus (South Georgia icefish): 117451933
Help
Entry
117451933 CDS
T09629
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117451933 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117451933 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117451933 (clip1a)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117451933 (clip1a)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
117451933 (clip1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
CLIP1
CLIP1_ZNF
Rod_CreS
Tup_N
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
117451933
NCBI-ProteinID:
XP_033946198
LinkDB
All DBs
Position
9:39064068..39093682
Genome browser
AA seq
2230 aa
AA seq
DB search
MSKASGIKGPSKIGRPPGTAAPKTNPSSAGSKVSATNKPAPDASAEDGAGESFQVGERVW
VNGNKSGHIQFLGEAQFAPGQWAGIVLDEAIGKNDGSVAGVRYFQCDALRGIFTRPSKLS
RTEGEANGTLTEPPSRASSPTPSVSSVASHTPVTKSTLPSTTTSTKKTSSTTPATPATPV
TPSNLTRTNSESVSNLSETGSVKKGERELKMGDRVLVGGTKAGVVRFLGETDFAKGEWCG
VELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRKVVATPT
GLKRSPSASSISSMSSVASSVSAKPSRTGLLTETSSRYNRKISGTTALQEALKEKQQHIE
QLMNERDTERAEVAKATGHVGEMAQEIGLLRDDQEQMETKMDQLRVLVEAADKEKVDLLN
QLEEERRKVEDLQFRVEEACITKGDLETQTRLEHAHIKELEQSLLFEKTKAEKLQRELED
NRVATVSERSRIMDLERDLSLRSREVADLRLRLGSQQGSEDSNSTLSPLLEEINSLRDQL
TSQETKQKEELAKYKEKLEAQEKSHSEAAAQLQAASVRLSGEHEQLQMRLSRAEKENADK
IDLWRSKLESSIASHQQAMDELKVSFSKGAGAQAEELIETKSALERLKVEHPLALEEAGA
KHEADAAAWTREKHALKTKLSSLIDDKERLEDSLRSSVERVEEQHLVEMEDVLGKLHAGE
LRVKELEDKETMLAQQAQDKDRETKEQMSEIVALRSQVAQGNRELVTLKSRMELVQNQGN
SQDSKVSELSSQVECRQQEVLSLKQTLTTVQQEKDALAQELGGMKQKMADSTEDQTKSSN
TMQETLEKLSQKEEQCTSLTTESESLRSQLSGLERKLKTADEKLEQLSKDKCKLENDISD
MMKTSGDSSVQLTKMNEDLMLKERRLEELQSQLTEEKEKAAHSNEQLQQEQTGKEQELKE
TRDAHQAQRSSLQDNITNLEKTVKQSETLVEELKEAQEKSSSQASELHAKDLGVLQSQVD
TLKQELSSSKDKTKELENLVSELQTYKEQAKCLSAELDSHKHDVEQLSKNMEKQNLDLEN
RCKESEDVKAEKSKLEKQLSDVQTKLSALEISHQELSVQTEELLLTEKKLSKHQEELLAN
NKSSAEERNSLNTELKKLKDLLQVENKKLEHAKGEHQAQVEELQRQREEKNDLLLKYQLD
FQQIEAKNKQLNEDYEKVCKEKNRLEDDLNESRSKLTSEKDNLILERDSARNAKKSLDAK
NAKLQEKLKSLNLEKEDLTMKNTQLQALTETLEKDKVEMSSEFSAAVLEKQSLATLKEEL
QSKLHVTKKDLESSVRECDEHKASKSSLAQMLEEFKTNSQVTDSERLHLLQEKEELVANQ
RKVCNEKEGLLKEIEELKETLQVATERLSKSNEKLKEALSSFEQEKQTFRLQSSEIEMSL
HVVRKENMSLDSALEQQKMDYERLAGEKGELEEMHTKTLSESNALSLERDKLASEIRTNR
DQLDSNSKTNDAVVQEKSHLTTMLEESKRQKDQIEAEMNSLKREKADFQNELQKHNSDIE
TLENGKAELIQEHSKLKTDFEKANCELVKQVDNLSKDSRGLKSLQADTDNKVQSLQNENR
ALLQEIQELKSKIDSISGAKLLLEAQLQTESSERNATKSDKEGLSKQIEELKQTLSKVTD
ENKEMSSNLRNTDEQNKSFIMDTKALQTQLKQREQEISRVTTDKEQLSSKLEDIGKRMTS
LTTEKEDLLAAKCQLEQNNSSLNTSQGTLHAERSKLLGEMEKMHNSQRQLEIDVKDLQIN
KDLLDKQYQSAVAEVSASAVVKEEISSSISNLASQKEALQVERDEAQQQVRQLESQLKNA
ISKQLEATEVSGSTAEALEQLTKEKATLMQEKNEAQSLLEELRGSTQKTETQLKTLKKNN
SKYQDDLNVSKEQLCIETQRTESLCKEIEELKEADSAKTQKLQDEKNKLNLELENNQNHQ
SDLEKLKDHNSKLKKQLKQSLPNNAYSESTSKEQHEKEKATLQKSINKNSALISEKDQQV
ETLKSELGALRGESASVKTLQGTIEALERDKTKLQDRVQRLEKDRAAGPESINRSSGDEV
LEQLRDDKQSAEIEFLNSVIVDLQKKNKEQKADLETMAAAALNGNNPSELDNYDDHDNQP
TKKKLPPRLFCDICDCFDLHDTEDCPTQMQMPDSPPHTTYHGAKGEDRSYCNICEVFGHW
TESCNDDQTF
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggccagtgggataaaagggcccagcaagatagggagaccgcctgggacagcg
gcccctaagaccaaccccagctcagcaggatctaaagtttctgcaaccaacaaaccggct
ccagacgccagtgcagaagatggtgccggggagagcttccaggttggagagcgagtctgg
gttaatggcaataagtcaggccacatacaatttttgggagaggctcagtttgcaccaggg
cagtgggccgggatcgttctggatgaggcaattgggaagaatgatggctcagtggcaggg
gtgcgctacttccagtgtgatgccctgcgagggatatttacccgcccatccaagttgtct
cgcacagagggggaggctaatggaactctgacagaacccccctcccgcgcctcttcaccc
actccttcagttagtagcgtcgcctcacatacacccgtcacaaaatcaacattaccctca
actaccacatcaaccaagaagacctcctccactacgccagcgacaccagcgacaccggtg
acaccatctaacctcacgcgcacaaacagtgaatctgtctccaacctctctgagactgga
tccgtcaagaaaggggaaagggaactgaagatgggcgacagagtattggtcggtggtaca
aaggcaggggtggtacgtttccttggagaaaccgattttgccaaaggcgagtggtgcggt
gtggaattggatgagcccttaggaaagaacgacggggccgtggcaggcacaagatatttt
cagtgccaaccgaagtatggcttatttgctccagtgcacaaagtcacacgcatcggcttc
ccttccaccacgccagccaaagcaaaaacaacggttcggaaagtagtggccacaccaact
gggctgaagcgcagcccgagtgcctcctctatcagtagcatgagctctgtggcgtcctct
gtcagcgccaagcccagccgcacaggcctgctaactgagacttcatcacggtataatcgt
aagatttccggcaccaccgccctgcaggaggcgctgaaggagaagcagcagcacattgag
cagcttatgaatgaaagggacacggagagagctgaagtcgccaaggcaacaggccacgtt
ggagagatggctcaagaaattggcctgctcagagacgatcaggagcagatggagaccaag
atggatcagttgagagtcttggtagaagctgcagataaagagaaagtggatctgctgaat
cagctggaagaggagcgaagaaaagtggaggaccttcagttccgcgtggaggaagcgtgc
atcaccaaaggagacctggagacgcagaccagactggagcatgcccacattaaggagctt
gaacagagcctactctttgaaaagaccaaagctgagaaactccaaagagagttagaagac
aatagggttgctactgtgtcagaaagatcccgtattatggaccttgagagggacctttca
ctacgaagccgagaggtagcggacctgcggctgcgtctcgggtcccaacagggctctgaa
gactcaaactctaccctgtctccccttctggaagagataaactctctgagggatcagctg
acttcccaagaaacaaagcagaaagaagaactagcaaagtacaaggagaagttagaagcc
caagaaaagagccacagtgaggcagccgcccagcttcaggctgcgtctgtccggctgtct
ggtgaacacgagcagctccagatgcgcttaagccgggctgagaaagagaacgctgacaaa
attgatctgtggcgttccaagttggagtcttccatcgcctctcatcagcaagccatggac
gagctaaaggtatcttttagcaaaggtgcaggggcccaggcagaagaacttattgaaact
aaaagtgcacttgaaaggctgaaggtagagcacccgttggctctagaggaggctggtgcc
aaacatgaggccgatgctgcagcttggactcgggagaagcatgcgctgaagacaaagctg
tcgtctttgatcgatgataaggagcgactggaggattctctacggtccagcgttgaaaga
gtagaggagcagcacctggtggagatggaggatgttcttggaaaacttcatgctggcgaa
cttagggtgaaggagcttgaggataaagaaaccatgttggcacaacaggcccaagacaag
gatagagaaaccaaagagcagatgtcagaaatagtggctctgcgcagccaagtagcacaa
ggtaaccgggaacttgtcaccctgaagagtcgaatggagctggttcagaaccaagggaac
agccaggattcaaaggttagtgaattgagctcacaggtggagtgccgacagcaggaagtc
ctctctttaaagcagactctgaccactgtacagcaggagaaggacgccctggcacaggag
cttggaggcatgaaacaaaagatggctgacagcacagaggatcagactaaatcatcaaat
actatgcaagaaacactcgagaagctcagtcagaaggaagagcagtgcacttctctgacc
accgagtcagagtctttaagaagtcagctttccggcctggagagaaagctgaagactgca
gatgaaaagcttgagcagctttcaaaggacaaatgcaagctggaaaatgatatttcagac
atgatgaagacatctggcgatagttcagtacagctgacaaaaatgaatgaagatctgatg
ctcaaagaaaggaggctggaggagttacagagtcaactgacggaggagaaggagaaggcg
gcacactcaaatgaacaactgcagcaagaacagaccggcaaagagcaggagctgaaagag
accagagacgcacatcaggctcaaaggagtagccttcaggacaacatcactaacctggag
aagactgtaaaacagagtgagaccttagttgaggagctaaaggaggcgcaagagaaatcc
tcctctcaggcttcagagcttcatgcgaaggaccttggggttcttcagagtcaggtagac
acgttgaagcaggagctctcctcatccaaggacaaaaccaaagagctggagaatttggtt
tctgagttgcagacttacaaagaacaggctaagtgtctttctgctgagcttgactcccac
aagcatgatgttgaacagttgtccaaaaatatggaaaagcaaaatctagatctggaaaat
agatgtaaggaaagtgaagatgttaaggcggagaaaagcaaactggagaaacagctttca
gatgttcagaccaaactctctgcccttgagattagtcaccaggagctttcagtccagact
gaagaactgctattaaccgagaaaaagctctcaaaacatcaagaggaactacttgccaac
aacaaatcctcagctgaagaaaggaattcattgaacacggaattgaagaagctcaaagat
cttcttcaggttgaaaacaaaaaactggagcatgctaaaggtgaacaccaggcccaagtc
gaggagcttcaaagacaacgggaagagaagaatgacttgctcctaaagtatcagctggac
ttccagcaaattgaggctaaaaataagcaactaaatgaagattacgaaaaagtctgcaaa
gagaagaaccgactcgaagatgacctcaatgaaagcaggtcaaagctcacaagtgaaaag
gacaatctcattttagaaagagattctgctagaaatgccaaaaagtctcttgatgctaag
aatgctaagttgcaggaaaaactcaagtccttgaacttagaaaaagaagatcttaccatg
aagaacactcagctgcaggccctcacagaaacacttgaaaaagacaaagtagagatgtct
tctgaattcagtgctgccgttttggaaaaacagagccttgcgacgctaaaggaggaactc
cagagtaagctccatgttaccaagaaagacttggagagctctgtccgtgaatgtgatgaa
cataaagcctccaaaagcagcctggcccagatgctggaagagttcaagaccaacagtcag
gtgacggattctgagaggcttcaccttctgcaggagaaagaagaactggttgcaaaccaa
aggaaagtctgtaatgaaaaggaagggctcctcaaagagatagaagaattaaaggagacg
cttcaagtcgctacagaacgactgtcaaagtccaacgagaaacttaaagaagcattatca
tcgtttgagcaagagaagcaaacgtttcgccttcagagttctgaaattgagatgtctcta
catgttgtacgaaaagaaaacatgagcctggattcagcattagagcagcagaaaatggat
tatgagcgtttagcgggggagaagggagagttggaagagatgcacacgaaaaccctatct
gagagtaatgctctttctctagagcgtgataagctagctagtgaaatccgaacaaataga
gaccagttggatagcaactccaaaactaatgatgccgttgttcaagagaagtctcatcta
acaacaatgctagaggaaagcaaacgacaaaaagaccaaattgaagcagagatgaactca
ttgaaacgagaaaaggctgactttcaaaatgagcttcagaaacacaactctgatatagaa
actcttgaaaacggcaaagctgaacttattcaagagcacagtaaactaaaaacagatttt
gagaaggctaattgtgaacttgttaaacaggttgataacctttctaaagatagtcggggt
ctgaagtcgttgcaggctgacaccgacaacaaagtgcagtccttgcagaatgagaatcgg
gctctgcttcaagagatccaagagttaaaaagtaagattgattcgatatcaggggccaag
ctacttctcgaggcccagctacagactgagtctagtgaacgcaatgcaactaaatctgac
aaggagggtctctccaaacaaattgaggagctgaagcaaacgttgtctaaggtcacagat
gaaaataaagagatgtcttctaaccttaggaacactgatgagcaaaacaagtcttttatc
atggacacgaaggcattacaaacgcaattgaagcagcgagagcaagaaattagtcgggtg
acaacagataaagaacagctatcatctaagcttgaggatataggcaaacggatgacctcg
ctgaccacagagaaggaagaccttctagctgcaaagtgtcaattggagcagaacaattct
tctctcaacacaagtcaaggaaccttgcatgcagaacggtctaaactcctcggggagatg
gagaagatgcacaatagccagagacaactagagattgatgtcaaggacctacaaatcaat
aaagaccttttggataaacaataccagagtgctgtcgcagaggtgtctgcttccgctgtt
gttaaagaagagatttcctccagcatctcaaatctagcctctcagaaggaggccctgcag
gtggagagagatgaagcccagcagcaagtcaggcagctggaatcccaactaaaaaatgcc
atttctaagcagcttgaggctacagaggtctctggctcgaccgccgaggctctggaacag
ctgacaaaagagaaagccactttgatgcaggagaagaacgaagcccaatctttgctggag
gagctccgaggctccacgcagaagacggagacacagctgaaaacattgaagaaaaacaat
tccaagtatcaagatgacctgaatgtatccaaagagcagctttgcatagaaactcagagg
actgagagtctgtgtaaggaaatagaggagctcaaagaagcagattctgcaaagacgcag
aagctgcaagatgagaagaacaagctgaatctggagctcgagaacaatcagaatcaccag
agtgatcttgagaagctcaaggatcacaactctaaactcaaaaagcagttgaagcaaagc
ctgccgaataatgcttacagtgagagcacctcgaaggagcagcatgaaaaggagaaggct
accctccaaaagtccatcaataaaaacagtgccttaatttcggaaaaggaccagcaggtg
gaaaccctgaagagcgagctgggtgcactgcgtggggaaagtgcctcggttaagactctc
caggggacgattgaggccttggagcgggacaagactaagttacaggatcgagttcaaaga
ctggagaaggaccgggcggcaggtcctgaaagcatcaacaggtcctcaggtgatgaagtt
ttggagcaactaagggacgacaagcagagcgcagagatcgagttcctgaattcagtcatc
gttgacctccagaagaaaaataaggaacagaaggcagacttggagacaatggctgctgct
gctctgaatggaaataatccaagtgagctggataactatgatgaccacgataatcaaccc
acaaagaagaagcttcctccaagactcttctgtgacatctgcgactgctttgacctccac
gacaccgaggactgtcccacacagatgcagatgcccgactctcctccacacaccacctac
cacggcgctaagggcgaggatcggtcatactgcaacatctgcgaggtctttggccactgg
accgaatcctgtaacgatgaccagaccttttaa
DBGET
integrated database retrieval system
