Pseudochaenichthys georgianus (South Georgia icefish): 117451935
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Entry
117451935 CDS
T09629
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117451935 (rims1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117451935 (rims1b)
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
117451935 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
117451935 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIM2a_ZnF
C2
FYVE_2
PDZ
PDZ_6
IBR
Motif
Other DBs
NCBI-GeneID:
117451935
NCBI-ProteinID:
XP_071059601
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All DBs
Position
1:complement(4560217..4654793)
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AA seq
1018 aa
AA seq
DB search
MSASVGPQGGPRPPTATPNMPDLPDLSHLTEEERKIIMAVMARQKEEEDKEQAMLKTLHQ
QFESYKQEVRRIGGDTRRQPPQLKDDAPTCGICRKTKFADGCGHLCSYCQTKFCARCGGR
VSLRSNNVMWVCNLCRKQQEILTKSGEWFSGSGVQPGSRGSSVDIPAIGGEAQRDRKLLR
SRSQAPPSITNSNAGPPDGTQPPTGVPAAKGADTMPGSRTQSEPPREKKRPVSLHEQNGK
GGMGRGSGRRPGGKLSSQSSLDERVVSGERGDRRLGEGRRLEKIHSQDYEDGEGNLGRSE
SHRRRPEDEEQRERQRREEEFQNRYRSDPNLARYPVKPQKEEQEMRMHAKVSKVRHERRH
SDLAINEVGLGPGEGGGGRGEVPENRLARRGGEGDKALLENHRAYSVDRTVGVGGGTLPA
GGGVRSGPQPGGPVPPDWGPNKGHLEPDTTRTPRVKGGDNLLRKDSQSSDQSESLRPPPP
RSYKSKRGVNKRQMSISSSEEEGGSTPEYTSCEDVDMESVSEKGDWDCHSLDPTVWHHPV
TWQPSKEGDHLIGRITLSKRSAMPREPGSLLGLKVVGGKMTEMGRLGAFITKVKKGSLAD
VVGHLRAGDEVLQWNGKSLPGATKKEVYNIILESKAEPQVEIVVSRPIGSINRIMSKNFL
RKVYRAYHDIPRIPESSHPPLESTGSSSFESQKMDRPSISVMSPTSPGTLRDLPVVLPGQ
LSVKLWYDKVGHQLIVNVLQAIDLPTRPDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKNA
EPKWNQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDIPHWY
KLQSHDMSSIPLPQPSPYLPRRHVHGDSPSKKLQSAERNSRERERGSTLAVPEQQRAVQH
RSRSVSPHREDSCRARSRPAHVPMQRSLDEIHQNRPHSHSPSRYHDSHLEHQRSGDSDYE
YSEDSEVLEMHRSIRGGSAECLHTNSDLQPQLDRVRSSSTTCLRPDNNFHSPDRDSMD
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcggtggggccccagggtggccctcgcccacccaccgcgacgccaaacatg
ccggacctgccggacctcagccacctgaccgaggaggagaggaagatcatcatggcagtg
atggctcggcaaaaggaggaagaggataaagaacaagccatgctaaaaacactgcaccag
cagtttgagagctacaaacaggaggtgcgccgcatcgggggggatacccggcgccagccc
ccgcagctgaaggacgacgcgcccacctgcgggatctgccgcaagaccaagtttgcagac
ggctgcggccacctctgctcctactgccagaccaagttctgtgctcgctgcggagggcgg
gtctctctgcgctccaacaatgtaatgtgggtatgcaacctgtgccgtaaacagcaagag
attctcaccaaatcaggagaatggttttcggggtcgggggtgcagcctgggagccggggc
agctccgtggacatcccagccattggaggtgaggcccagcgggacaggaagctactccgc
tccaggtcccaagccccgccctccatcaccaactccaacgcaggtccgccggacgggacg
cagccccccaccggtgtccctgctgccaagggggcggacaccatgcccggctcccggacc
caaagtgaaccaccgcgagaaaagaaaaggccagtttccctccatgaacagaatgggaaa
ggaggcatggggcggggcagtggccggagacctggagggaagctgtcctctcagtcatcc
ctggatgagcgagtggtgtctggggaaagaggcgacagacgcttaggagaaggacggagg
ctggagaagatccactctcaggactacgaggacggggaggggaacttgggtcgttcagag
tcgcaccggagacgcccagaggacgaggagcagagggagcgccagcgccgggaggaggag
ttccagaaccgttaccgtagtgatcccaacctggcacgataccctgtgaaaccacagaag
gaggagcaggagatgcgcatgcacgctaaggtatccaaggtccgccatgaacggcgacac
agcgatctggctatcaacgaggtgggactgggacctggggaaggaggagggggacgaggg
gaggtgcctgagaaccgtctggccaggaggggtggggagggggacaaggccctcctggag
aaccaccgagcctactctgtggataggaccgtgggggttggagggggaactttgcctgca
ggaggtggagtgagatcaggaccccaacctgggggaccggtgcctccagattggggcccg
aacaaaggccacctggagcccgatacaacacggacaccaagggttaagggtggggacaac
ctgctgaggaaggactctcagagttcggaccagtcggagtctttgcggccgccccctcca
cggtcatacaagagcaagcgcggagtcaacaagaggcagatgtccatcagcagctcagag
gaggaaggcggctccacgcccgagtacaccagctgtgaggacgtggacatggaaagcgtc
agcgagaaaggtgactgggactgtcattctctagatcctacagtgtggcatcatccagtt
acatggcagccatccaaagagggtgaccacctgatcggacgcatcacactgagcaagaga
tcggcaatgccccgtgagcctggctctctcctcggcctgaaagtggtaggagggaagatg
acagagatggggagactcggggccttcatcaccaaagtcaagaaaggcagccttgcagat
gttgttggacacctacgagcgggtgatgaggtgttgcagtggaatggaaagtcgttgccg
ggagcaacaaagaaagaagtgtacaacattatccttgaatccaaggctgaacctcaagtg
gaaatagttgtttcaaggcctataggctctatcaaccgaattatgtccaaaaacttcttg
agaaaagtgtatagagcctatcacgacatcccaagaatcccagagtcctcccaccctcct
ctagaatctacaggctccagttcctttgagtcgcaaaagatggaccgaccctctatatcg
gtgatgtccccgaccagccctgggaccctcagagaccttcctgtagtactgcctggacag
ctctctgttaagctgtggtacgacaaagtgggccatcaattgatcgtcaacgtccttcaa
gccatagacctgccaacccgaccagacggacgacctcggaacccctatgtcaagatgtac
ttcctgcctgataggagtgataagagtaaacgacggactaaaaccgtgaagaagaatgct
gagcccaagtggaaccagaccttcttgtattcccacgttcaccggcgggacttcagagaa
cgcatgctcgagatcacggtctgggaccagcccagggtccaggaggaggagagtgaattc
ttaggagagatcctgatcgagttggagacagctctgctggacgatatccctcattggtac
aaactccaatcacatgacatgtcctcgatacctctgccccagccttccccgtacctcccg
cgcagacacgtccacggagacagccccagcaagaaactacagagtgcagagcgtaactcc
agggagagagagcggggcagtacactggcggtgccggagcagcagcgggccgtgcagcac
cgctcccgctccgtgtccccccacagggaggactcctgcagggcccgctcccgccctgca
cacgtgccaatgcagaggagtctggatgagatccaccagaaccgcccccactcccactcg
ccctcccgctaccacgactcccacttagagcaccagcgctccggggactcggactacgag
tactctgaggacagtgaggtcctggagatgcacaggtctatccggggcgggagtgccgag
tgcctgcacacaaacagcgacctgcagccgcagttggacagagtgaggagttccagcacc
acatgtctgagaccagacaacaactttcactcccctgacagagacagtatggactag
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