Pseudochaenichthys georgianus (South Georgia icefish): 117452046
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Entry
117452046 CDS
T09629
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117452046 (tfip11)
Spliceosome [BR:
pgeo03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117452046 (tfip11)
Other components
Complex C specific factors
117452046 (tfip11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
117452046
NCBI-ProteinID:
XP_033946359
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All DBs
Position
9:complement(36884364..36889684)
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AA seq
835 aa
AA seq
DB search
MSMSHLYGRREEEEDGVEVESFEVTDWDLANEFNPGRQRHRPTKDQATYGIWADRDSDED
ERPSFGGKNSKDYTAPVNFVSAGLRKSAAEEKLQKAEGGSDDSEDEGPSAPPPPPPRSTA
PKKLQMGTFRGNQPQRFAGGIQSGKGLGTWEKHTRGIGQKLLQKMGYQPGKGLGKNAQGI
INPIEAKLRKGKGAVGAYGNERTKQSLQDFPTVDSEEEEEKEFQKELGQWRKDPAGSVGK
KKPKYSYRTVDELKSKGKLAGRTTAVSAGELAQVKVIDMTGREQKVYYSYSQMTNKHSVP
DEGPPSLSTQDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESRA
LQSRLEAEQDSIQRIEAVLELVGRFPSGEMAPGEEGPSLQECARIFETLQTDYYEEYKTM
GLADLAVAVVQPLLKDKLRSWDPLKDSSYCLEDIGQWRAILESRDFHSSAPDSNMDPYHR
LLWEVWISVMRPCVTAWQPRNVGPMVDCVELWAPILPLWILDHLMEQLILPRLQREVDTW
NPLTDTVPIHSWIHPWLPLLQARLEPLYPPIRSKLSNALQRWHPSDTSARLILLPWKDVF
TPGAWEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVMDWEGMLSPSSLVSLLDKNFF
TKWLQVLCSWLSNSPNYEEITKWYLGWKTMFSDALLTQPLIKDKFNEALDIMNRAVSSGM
GGYMQPGARENIAYLTQTERRKDFQYEAMQERRDAESVAHRGISSGVPTNFKDLIQAKAE
ENNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatctatatgggaggcgggaggaggaggaggatggtgtggaggtggag
agctttgaggtgacagactgggacctcgccaacgagtttaacccagggcgtcagagacat
aggccgaccaaggatcaggccacctacgggatctgggctgacagagactcagacgaggat
gagaggcctagctttggtggcaagaactccaaagactacactgctccagtaaactttgtg
agtgctggactgcgtaagtctgcagcagaggagaaactgcaaaaagcagaaggaggctct
gatgactcagaagatgaaggtccttcagcaccaccgccacccccccctcgcagcactgca
cccaaaaaactccaaatgggtactttccgggggaaccagccccagaggtttgcaggtggc
attcagtctgggaaaggccttggtacctgggagaagcatacgaggggaattggacagaaa
cttctgcagaaaatgggataccaaccaggcaaaggactgggcaagaatgctcaaggtatc
ataaacccaattgaggcaaaacttcgtaaaggaaagggagcagtgggtgcctatggcaat
gaacgaactaagcagagtcttcaggactttcctaccgttgactcagaggaagaggaggaa
aaggaatttcagaaggaacttggccagtggcgtaaggatccggcaggctctgtaggaaaa
aagaaaccaaagtactcctacaggactgtggacgagctaaaatctaaaggcaagctggca
ggacgcactacagccgtatccgctggggagctggcacaggtcaaggtcatagatatgact
ggaagagaacaaaaggtatattatagttacagtcagatgaccaacaagcacagtgttcca
gatgaaggtccaccaagcctctccactcaggatcagaagggatctggctttgctctccct
gaactcgaacataacctgcagcttctgatagacctcacagaacaagacatattacagtcc
gccagacgtctgcagcatgaaaaagatgtagttgtgtctctgagccatgagtcacgggca
ctgcagagcagactggaggcagagcaagattccatccagagaatagaggccgttctggaa
ttggtggggcgttttccttctggagagatggcacctggggaggagggacccagcctgcag
gagtgtgcccgaatctttgagactttacaaacagactattatgaagaatacaagacaatg
ggattggccgacctggctgtagcggttgtacagccattactcaaggacaaacttcggtcc
tgggaccctttgaaggacagctcctattgtctggaagacatcggtcagtggagagcaatc
cttgaatctagagacttccacagtagtgccccagattcaaacatggacccttaccacaga
ctgttgtgggaggtgtggatctcagtgatgcggccctgtgtgacggcgtggcagcctcgt
aacgtggggccaatggtggactgcgtggagttgtgggctcctatactccctctgtggatc
ctggatcacctgatggagcagctgatcctcccccggctacagcgagaggtggatacctgg
aaccctttaactgacacagtgcccatccactcctggatccatccttggttgcctcttcta
caagcacgtctagagcctctttacccaccaatcaggagcaaactatccaatgccttgcag
cgatggcatcccagcgacacttcagcccgcctcatcctgctgccttggaaagatgttttt
actccaggtgcatgggaggccttcatggtgaagaacatcatccctaaactagctctgtgt
ctggaggagctggttatcaaccctcaccagcagcagatggagccatttcactgggtgatg
gactgggagggcatgttgtccccctccagcctggtgtcgctgctggacaaaaacttcttc
acaaagtggttgcaggtcttgtgctcatggttgagcaacagtcctaactacgaggaaatc
acaaaatggtacctgggttggaaaaccatgtttagtgacgccttgttaacacagcccctc
attaaagacaaattcaacgaagctttggacatcatgaaccgcgcagtgtcttcaggcatg
ggtggatacatgcaacctggtgcaagagagaacattgcatacctcacacagacagagagg
cgaaaagacttccagtatgaagcgatgcaggagcgtagagatgcagagagtgtggctcac
agaggaatcagctcgggtgtgccaactaacttcaaagatcttatccaggcaaaggcagag
gagaacaacattgtcttcatgcccttagtggcgaaacggcacgagggcaaacagctgtac
acctttgggcgtattgtcatctacatcgacagaggggttgtgtttgtgcaaggagagaaa
acttgggtccccacgtctttgcagagtctgatcgatatggccaagtga
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