Pseudochaenichthys georgianus (South Georgia icefish): 117452053
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Entry
117452053 CDS
T09629
Symbol
snx2
Name
(RefSeq) sorting nexin-2
KO
K17917
sorting nexin-1/2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117452053 (snx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117452053 (snx2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117452053 (snx2)
Membrane trafficking [BR:
pgeo04131
]
Endocytosis
Macropinocytosis
Sorting nexins
117452053 (snx2)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117452053 (snx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
HR1
DUF3557
Motif
Other DBs
NCBI-GeneID:
117452053
NCBI-ProteinID:
XP_033946374
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All DBs
Position
9:7943012..7987860
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AA seq
509 aa
AA seq
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MADTARDPPPDHTDFHELEDGEDLFPEPTSTLESGPASLPAEDISTNSNGPKRDSLFDDD
TEDLFAEATEEVSLDSPERDVLLSDGPSPAITPITPPISILTPRLGLAHDDMFTHSSFDE
IEEEKGDDSFDMHISVSDPEKVGDGMNAYMAYKVSIKTSISLFKSQEFSVKRRFSDFLGL
HSKLASKYLHIGYIIPPAPEKSIVGMTKMKVGKEDQSSNEFVEKRRSALERYLMRTVKHP
ILLKDPDVLQFLESSELPRAVSTQALSSAGLLRMVNKAAEAVNKMTIKMNESDAWFEEKQ
QHFENLDVQLRKLHASVESLVCHRKELSVNTAQFAKSAAMLGNSEDHTALSRALSQLAEV
EEKIDQLHQDQANGDFYLFSELLGDYVRLIIAVKGVFDHRIKTWQKWQDSQMLLQKKREA
EAKMQFNNKPDKLQQAKDEIRELEGKVEQGERDFEQISKTIRKEVSRFEKERVTDFKAII
IKYLESLVQTQQQLIKYWDAFLPEAKAIS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacggccagggaccctccaccggaccacaccgacttccatgagctggaggac
ggggaggacctgttcccggaaccgacttccactctggagtcaggaccagccagtctgcct
gctgaagacatcagcaccaactcaaacggacccaaacgggactcgctgtttgatgacgat
acagaggacctgttcgcagaggccacagaggaggtttcgttggacagtccagagagggac
gtcctgctgtctgatggcccgtcgcccgcaatcacccccatcaccccccccatctccatc
ctcaccccccgcctcggcctcgcccatgatgacatgttcacacactcctccttcgacgag
attgaagaggagaagggcgacgattcattcgacatgcacatatcagtctctgacccagag
aaagtgggagatgggatgaatgcgtacatggcctacaaagtgtcgatcaagacgtccata
tctctgtttaagagccaggagttctcagtgaaaaggcgtttcagtgattttctgggtctg
cacagtaaactggcctccaagtacctgcacataggctacatcatcccccctgcgccggag
aaaagcattgtggggatgaccaagatgaaggtggggaaggaggaccagtcgtccaacgag
tttgtggagaagaggagatcggcactggagaggtatctgatgagaacagtgaagcatccc
atcctgctgaaggatcccgacgtgctgcagtttctggagagctcagagttgccgcgggcg
gtcagcactcaggctctgagcagcgccggtctcctgcggatggtcaacaaggccgcagag
gccgtcaacaagatgaccatcaagatgaacgagtcagacgcttggtttgaggagaagcag
cagcactttgagaatctggacgttcagctgaggaaacttcatgccagtgtggagtctctg
gtctgtcacaggaaagagctgtcggtgaacacggcgcagtttgccaagtcggcggccatg
ttggggaacagcgaggaccacacagctctgtcccgggctctgtcccagctggccgaggtg
gaggagaagatcgaccagctgcaccaggaccaggccaacggagacttctacctcttctct
gagttactgggggactatgtccgcctcatcatcgccgtcaagggcgtgtttgaccatcgt
atcaagacgtggcagaagtggcaggacagccagatgctcctacagaagaaacgagaagcc
gaagccaagatgcagttcaacaacaaaccagacaaactgcagcaggccaaagacgagatc
agagagctggaggggaaggtggagcagggagaaagagactttgaacaaatctccaaaact
atacgcaaagaagtcagcaggtttgagaaagagagagtgacagactttaaagcgattata
atcaaatacctggagtcactggttcagacacaacagcagctgattaaatactgggatgct
ttcttacccgaggctaaggccatctcatag
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