Pseudochaenichthys georgianus (South Georgia icefish): 117452058
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Entry
117452058 CDS
T09629
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117452058 (kcmf1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117452058 (kcmf1)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117452058 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
DUF6244
Di19_C
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
117452058
NCBI-ProteinID:
XP_033946383
LinkDB
All DBs
Position
9:complement(20714418..20728097)
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AA seq
416 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVD
FDLYYGGEAFSVEQPQAFTCPYCGRMGYTEISLQEHVAAEHTETSTEVICPICAALPGGD
PNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSTTGG
LSTSQSSSQSSNYSREAMDPIAELLSQLSGVRRSAGGQLSSGPSASQLQQLQMQLQLERQ
QAQAARQQLETARNATRGVGRANAILNSNSAAANPNPSANHNSNSSPNPGPPESNTQHPA
HSSQFLLSRLSEPRLSEAERQACEAQWADRSLFVTELLLSTLLPDDDASASSSDEDDCHG
SLRNFADFEAMGCVEVMTLDVALENLNLKEMTPATKTTKTTSKTAPTKKEPPAPPL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccatgaaggcgtgagctgcgatgcatgtttaaaaggcaacttcagaggtcga
cgatacaaatgtttaatctgctatgactacgatctgtgcgcatcgtgctacgagagcggt
gcaaccacaaccagacacaccacagagcatcccatgcagtgtatattaacccgagttgac
tttgacctgtactacggtggagaggcgttctcagtggagcagccccaggccttcacatgt
ccctactgtggcaggatgggctacacagagatctccctgcaggagcacgtggctgcggag
cacacagagacctccacagaagtgatctgccccatatgtgcagcgctgccaggtggcgac
ccgaatcacgtgacggatgactttgctgcacatctcacactcgaacacagagcgcccaga
gacttggatgagtccagtggggtgcggcacgtgaggcggatgttccaccctggccgcggg
ctggggggtccccgagcccgcaggtccaacatgcacttcaccagcagcaccacggggggg
ctctccaccagccagagctcctcacagagctccaactacagcagagaggccatggacccc
atagcagagcttctgtcccagttgtcgggggtgcggcgctcggcgggggggcagctcagc
tcgggcccctcagcctctcagctccagcagctccagatgcagctgcagctggagcggcag
caggcccaagccgcgaggcagcagctggagacggcccggaacgccacccggggggtgggc
cgcgccaacgctatcctcaacagcaactcagccgcagctaaccccaaccccagcgccaac
cacaactccaactccagccccaacccgggacccccggagtccaacacacagcaccctgca
catagctcccagttcctactcagcaggctgagcgaaccgcggctctctgaggcggagcgg
caggcgtgcgaggcgcagtgggctgaccgcagcctgttcgtgacggagctgctgctgtcc
acgctgctgcccgacgacgacgcctcagcctcctcctccgacgaggacgactgtcacggc
tcgttgcggaatttcgctgacttcgaggccatgggctgtgtagaggtcatgaccttggac
gtggcgctggagaacctcaacctaaaggaaatgaccccggctaccaagacgacgaaaaca
acgtctaaaacagcgccaaccaagaaagagccccccgcaccgcccctttga
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