Pseudochaenichthys georgianus (South Georgia icefish): 117452071
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Entry
117452071 CDS
T09629
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117452071 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pgeo03310
]
117452071 (rorb)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117452071 (rorb)
Nuclear receptors [BR:
pgeo03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
117452071 (rorb)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117452071
NCBI-ProteinID:
XP_033946412
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Position
9:31054695..31073182
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AA seq
491 aa
AA seq
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MTWGGEGSLGTSSSKSNTMRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNA
AYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQA
RLLLERQQQTGEAEALARVYSTSLTNGLSTLNHEIGGTYANGHVIELPKGGHVNGAVVPG
GYYGIDSTQPSPDQSGLDMSGMKHIKQEPVYDLTPVPNLLSYSGYQDIQLGPNNVSMGEL
DRIAQNIIKSHLETCQYTTEELQQLAWQTHSYEEVKMFQGKPRDVLWQQCAIQITHAIQY
VVEFAKRISGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKA
LGCDDLVSAVFDFAKSLCALQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFAL
QHIMQKNHMDEDALAKLISRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNP
DPNSGVMAMPK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacttggggaggggaggggagcctcggcacgagctccagcaaatccaacaccatgcga
gcccaaatcgaggtcataccttgcaaaatctgtggagacaaatcatcaggtatccactac
ggagtcattacatgtgagggatgtaagggtttcttcagaaggagtcagcagaacaatgct
gcctactcctgcccccgccagaggaactgcctcatcgacaggacaaaccgcaaccgctgc
caacactgtcgcctgcagaaatgtctcgccctaggaatgtcgagagatgcggtaaagttt
ggccgcatgtcaaagaagcagcgtgacagcctgtatgcagaggtgcagaagcaccaggct
cggctgctgttggagcggcagcagcagacaggcgaggcagaagccctcgcacgagtttac
tcaaccagcctaaccaacggactgtccacccttaaccatgagattgggggcacctatgcc
aatggtcacgtcattgagctgcccaagggtggccatgttaacggagccgtagtcccaggg
ggatactatgggatagactccacccagccgtctccggatcagtcagggctggacatgtcg
ggcatgaagcacattaagcaggagccggtgtatgacctgacgccggtgcccaacctgttg
agctatagcggctaccaggacattcagctgggacccaacaacgtcagcatgggagagctg
gaccgtattgctcagaatatcatcaagtctcacctggagacgtgtcagtacacaacagag
gagctgcagcagctagcctggcagacacactcctacgaagaggtcaaaatgttccagggc
aagccccgggacgtgctgtggcagcagtgtgccatccagatcacccatgccatccagtat
gtggtggagtttgcaaagcgcatctcggggttcatggagctgtgccagaacgaccagatc
ctcctgctcaagtcaggttgtttggaggtagtcttggtgcggatgtgcagggcattcaac
cctctcaacaacactgtgctctttgaagggaagtacggcggcatgcagatgttcaaagct
ttaggttgcgatgacttagtgagtgccgtgtttgactttgccaagagtttgtgtgcactg
cagctgacagaggaggagatcgctctgttctcggcagctgtactcatttccacagatcgg
ccttggttgatggagcctcggaaagtccagaagctccaggagaagatttactttgctctg
cagcacattatgcagaagaaccacatggacgaagatgcactggcaaagctgatcagccga
atcccaacgttgtcagccctgtgcacgctccacaccgaggagctccaggccttccagcag
ctccacccggaaacagtcaacgtcctattccctccgctctacaaagaactgttcaaccct
gaccccaactctggggtcatggccatgcccaagtga
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