Pseudochaenichthys georgianus (South Georgia icefish): 117452124
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Entry
117452124 CDS
T09629
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117452124 (smarcad1a)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117452124 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
ERCC3_RAD25_C
T2SSK
HHH_3
Motif
Other DBs
NCBI-GeneID:
117452124
NCBI-ProteinID:
XP_033946493
LinkDB
All DBs
Position
9:complement(26361077..26376273)
Genome browser
AA seq
1063 aa
AA seq
DB search
MFNLDRFRYDKKTTKDNEEDSGSQSPESEKENKPAKMKPVKAQTKSNARGVVFEEVITID
LEEDELISETKNKTLARKFKNPIGKSSKHVASDHTDEEDCELKEKTDRLLEMFPQLTRTQ
VLEVIKNTSTLDGAAAECILRFGDKEAPDQGRKRKQDGSGSSQNSGEDQPSKKNRPLEVS
DEEDEGDKSPSREKKEAMVRKLQKKFPDQDKEELRMVLQEHDWNVEDALQVLQMFSDPGE
SSFSSPDSNENKSRKSKSKETSSKDHRKSRLHKDHRDSKSRKDRKDSEDDILSESEENNK
GDQDGDTEGTQDSEDPDSDSSIDLRNKRSTSTLVKSPDLVSSSSSVKKFTTSAFLMPSSS
TSPAQMLSRFASGTSIAKKQAAERKKKVLASDEHVSSEGENDDEEEPVSSEFEDSDDELD
CKGGMTDLKKEMLQFFQDATIDELSLISGCSIKKAKKILERRPFEGWQSLVDFFTKDKGL
SENLLMGCRVVLKERKVVLGLMSKCQTISSKMVKQVTAVMERGTAALKQPKLLNRKNQLK
PYQLIGLKWMLLMYEHKLSGILADEMGLGKTIQAIAFLAELYQMGIEGPHLIVVPASTLD
NWVREMKLWCPSLKVVVYCGSLEDRRYLRHVLLDDKTEYNVIVTTYNMAIGNDNDRGVFR
KLRLKYALFDEGHMLKNMNSLRYRHLMSINAEHRLLLTGTPLQNNLLELMSLLNFIMPSL
FSSSTHQLSKMFSMKSHEEQSRFERDRISQAKLIMKPFILRRVKSEVLKQLPAKVEKVES
CPMSEKQQVLYQNMFKKLKTTIIGEKRELCNVMMQLRKMANHPLLHRQYYTTEKLKAMSK
LMLKEPTHFDANAVLIQEDMEAMSDFELHLLCKQFSSIGSYQLETELLLDSGKFHHLTEL
LASHKNKGDRVVLFSQFTMMLDIVEVLMRHLKHRYVRLDGSTPIADRIGLIDEYNTDPDI
FVFLLSTRAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKTVQVTKLISKDS
IEAIMLQLGQRKLKLEQDMTAAEGGEGTIPEDMASLLKASLGL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacttagaccgttttcgttatgataagaagacgacaaaagacaacgaagaggat
agtgggtcccaaagtcccgagtctgagaaggagaacaagccagcaaagatgaaaccggtc
aaagcccaaacaaagtccaatgcccgaggagtggtttttgaggaagtcattacaattgac
ctagaggaggatgagctcatctctgaaacaaaaaacaaaacattagctaggaagttcaaa
aaccccataggaaaatcatcaaaacatgtggcatcagatcacacagatgaggaggactgt
gaactgaaggagaaaactgacagattactggagatgtttcctcagttgacaagaacgcag
gtactggaggtaattaagaacacaagcacattggatggggctgcagctgaatgcatttta
agatttggtgataaagaagccccagaccaaggcaggaagagaaagcaggatggatccggc
agttctcagaacagtggtgaggatcaacccagcaagaagaacaggccattagaggtttct
gatgaagaagatgagggagacaaaagtccaagccgagagaagaaggaagccatggtcaga
aaactgcagaaaaagtttcctgaccaggacaaggaggagctgcgtatggttctgcaggaa
cacgactggaatgtagaggatgctctgcaggttctacagatgttctcagaccctggtgaa
tccagtttcagctctcctgactcgaatgaaaacaaatccaggaaatccaagagcaaggaa
acgtcgagcaaggaccacaggaagtcgaggttacacaaagatcacagagacagtaaaagt
agaaaagatcgaaaagactccgaagacgacatattaagtgaatcagaggagaacaataaa
ggtgatcaagatggtgatacagaaggtacacaagacagtgaggatccagattccgacagc
agtattgatttgagaaacaaaagaagcacttcaacacttgtaaaaagtcctgacttggtt
tcttcatcatcctctgtcaagaaattcactacctctgcattcctgatgccatcctcctcc
acctctcctgctcagatgctttccagatttgccagtgggaccagtatagctaagaagcag
gcagcagagagaaaaaagaaggttcttgcctcagatgaacatgtcagttctgagggtgaa
aatgacgatgaagaggaaccggtaagcagtgagtttgaggactcggatgatgagctggat
tgtaaaggtggcatgacggatctgaagaaagagatgctccagttcttccaggacgcaaca
atcgatgagctgtctctaatctctggctgctctattaaaaaggccaagaagattttggaa
cggaggccctttgagggctggcaaagtctggttgatttcttcactaaggacaagggacta
tcggagaacttactgatgggctgcagagttgtcttaaaagagcggaaggttgtcctgggg
ctgatgtccaaatgtcaaaccatttcctcaaaaatggtcaaacaggtcactgcggtaatg
gagaggggcacagcggctctgaaacagcccaaactcctcaacagaaagaaccagctcaaa
ccctatcagctgattggtctaaagtggatgctgcttatgtatgagcacaaactgagtggg
atcctcgctgatgaaatgggtttggggaaaactatccaggctatagcatttctggccgag
ctgtatcagatgggaatagagggtcctcacctcatcgttgtgccagcttccaccctggat
aactgggtcagagagatgaagctgtggtgtccaagcctcaaagttgtagtctattgtgga
tccttagaggaccgccgctacctcagacacgtactccttgatgacaagactgaatacaac
gtcattgtgaccacatataacatggccatcggaaacgataacgaccgcggtgtgttccgt
aaactgcgtctgaagtatgcattgtttgatgaaggtcacatgctgaagaacatgaactct
cttcgataccgccaccttatgtctattaatgcagaacatcgcctgctgctgactggaact
cctctacagaacaacctcttggagctcatgtctcttctgaacttcatcatgccttctttg
ttctccagctccactcaccagctctccaaaatgttttcaatgaaatcccatgaggagcag
agccgctttgaaagggaccgtatttctcaggctaaactcatcatgaaaccttttatcctc
cgaagagtcaagagcgaggtcctcaagcagctgccagccaaggtggagaaggtcgagtcc
tgcccgatgagtgagaagcagcaggttctctaccagaacatgttcaaaaaactcaagact
accattataggagagaagcgcgagttgtgtaatgtgatgatgcaattgaggaaaatggcc
aaccaccctttgcttcatagacaatactacaccacagaaaagctcaaagcaatgagcaaa
ctcatgctcaaggagccaactcacttcgatgcaaacgctgttctgatccaggaggacatg
gaagcgatgtcagactttgagctacatctgctgtgcaagcagttctcctccatcggctct
taccagcttgagactgaacttctgcttgactcagggaaatttcaccacctcacagagctg
ctggcctcacataaaaacaagggtgaccgagtggtattattcagtcagttcaccatgatg
ctggatattgtcgaggtgctgatgcggcatcttaagcatcgttatgtcagactggatgga
tccacacccatagccgacaggattgggttgattgatgagtacaacacggatcctgacata
tttgtgttcctgttgtcaacgcgtgctggtggcctgggcatcaacctcacatccgctaat
attgtcatcctacatgacattgactgcaatccctacaatgacaaacaggcagaggacaga
tgtcaccgtgtaggccagaccaagactgtacaggtgacgaagctgatcagcaaggacagc
atagaggccatcatgctgcagctgggccagaggaaactgaagctggagcaggacatgacc
gctgctgaaggtggtgaggggaccataccagaagatatggcgtctttgctcaaagcctca
ctgggactgtga
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integrated database retrieval system
