Pseudochaenichthys georgianus (South Georgia icefish): 117452210
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Entry
117452210 CDS
T09629
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117452210 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117452210 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117452210 (usp30)
04121 Ubiquitin system [BR:
pgeo04121
]
117452210 (usp30)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117452210 (usp30)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117452210 (usp30)
Membrane trafficking [BR:
pgeo04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117452210 (usp30)
Ubiquitin system [BR:
pgeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117452210 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
117452210
NCBI-ProteinID:
XP_033946596
LinkDB
All DBs
Position
9:complement(37630759..37642184)
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AA seq
532 aa
AA seq
DB search
MKQSTSASRYASSGTWPHKLEFRHESSRMLWCRPESSDKLVKEFLGSGQIVRNKMIKNWG
IIGGVAAAVAAGVYVLWGPITDRRKRKRGMVPGLLNLGNTCFLNSLLQGLAACPSFIRWL
ETVIGLPPTQSCKDNQLSTTLLQLLNGLSRDEPGEEDILDAGCLLDVLRLYRWHISSFEE
QDAHELFHVLTSSLDEERDRQPKIVPLFDMQSLESIPDQDEKTMTCRSRGPLHPIPSPWK
SQNPFHGCLTSNMSCKRCEQQSPVRYDSFESLSLSIPLPQWGRPVSLDQCLQHFISSETI
KEVDCENCTKLQQGTSVNGEVLGSQRTTFVKQLKLGKLPQCLCIHLQRLTWSNEGSPIKR
PEHVQFTEYLSMGRYKHNAHTHRSQRIKCALNPKKAEGSDDSTEKLSANGTGAEHPDNNN
KPFSNGTFSSVFLQSPGLNPQHGFTNDFSSTEYLFQLTAVLVHHGDMHSGHFVTYRRSPC
SARPSSPFSSQWLWVSDDSVRKASLQEVLSSNAYMLFYERVRRLNLAPRSEE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatccacctcagcatctcggtacgcttcttcagggacatggccccacaaactg
gagttccgccatgaaagcagcaggatgttgtggtgcagacctgaaagctctgataagctt
gtgaaggagtttcttggctctggacaaatcgtcagaaacaaaatgataaagaactggggt
atcatcgggggggtagctgctgcggttgcagctggagtctatgtgttgtggggcccaatt
acagatagaaggaagagaaagagaggtatggttcctggtttgttgaacttaggcaacacc
tgcttcctgaactctttgcttcagggtttggcagcatgtccgtctttcatccggtggctg
gagacggtaataggattgcctccaacccagtcctgcaaagacaatcagctgtccacgaca
ctgctccagctactcaatggtctgtccagagacgagccgggggaggaagatattctcgat
gccgggtgcctcctggatgttctccgactgtaccgctggcacatcagttcctttgaagag
caggatgcacatgagctctttcatgttcttacgtcttctctggatgaggagcgggatcgg
cagccgaaaatcgttcccttgtttgacatgcagtccctcgagagcattcctgatcaagat
gagaaaactatgacctgcagaagtcgaggccctctgcatccgataccaagtccttggaag
tctcagaatccttttcatggttgtttaacaagcaatatgtcatgcaagcgctgcgaacaa
caaagtccggtgcggtacgactcatttgagagcctttccctgtccatccctttacctcag
tggggtcgacctgtctctctagatcagtgtcttcaacattttatttcttcggaaaccatc
aaagaagtggattgtgaaaactgcaccaagcttcaacaagggacctcagtaaatggcgaa
gttcttggaagccagaggacaacatttgttaaacagcttaaactgggaaagctcccccaa
tgcctctgcatccatttacaaaggctgacgtggtccaacgaaggctcccccatcaagaga
ccggagcatgtgcagtttacagagtatctctcgatgggccgctacaaacacaacgctcac
acacacagaagtcagcggatcaaatgtgctctgaatcccaaaaaggcagaaggttcagat
gattccacggaaaagctctccgctaacggcactggagcagagcatccggacaacaataac
aaacctttttccaacggaacattttcctctgtgtttcttcagtctcctggcttgaaccca
cagcacggcttcacaaatgacttcagttctacagagtaccttttccagctcacggccgtg
ctggtgcaccacggcgacatgcactcgggacacttcgtgacgtaccgccgcagcccctgc
tcggcccgcccctcctcacccttcagctcccagtggctctgggtgtccgacgactcggtt
cgaaaagccagcctacaggaggtgctgtcgtccaacgcctacatgctcttctacgagaga
gtccggaggctgaacctcgctccgcgctcggaggagtaa
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