Pseudochaenichthys georgianus (South Georgia icefish): 117452229
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Entry
117452229 CDS
T09629
Symbol
abcb9
Name
(RefSeq) ABC-type oligopeptide transporter ABCB9 isoform X1
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo02010
ABC transporters
pgeo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117452229 (abcb9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117452229 (abcb9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117452229 (abcb9)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117452229 (abcb9)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117452229 (abcb9)
Transporters [BR:
pgeo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
117452229 (abcb9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
AAA_30
AAA_25
AAA_29
nSTAND1
Motif
Other DBs
NCBI-GeneID:
117452229
NCBI-ProteinID:
XP_033946623
LinkDB
All DBs
Position
9:46557429..46584268
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AA seq
818 aa
AA seq
DB search
MGFSEKDYKYMSGFQSTISMGVKVSLIVAVLFILLDLILTTVLFTQGSHWSVFREEALNF
DLLSSVLDLWGCVLLRGPLLLGACIGVSWNKQDGPPRVSTLSTPMLLLCLVIITFALAKM
LMLSEQEPLTQQPWCLSLICWTCVSSLLVVLIWNQIGKKEAGKSPDRSSRRGCEDTEKLV
GRAEEESERKKEEEEMKSGSGATLGRLLSYCRKDGGLMSVAVLFLLVSAVCEAFIPYYYG
KAIDSIVVHQSMEYFAKPVITLSALALVSSLAMGVRGGVFTLMFGKLNLRLRNHLFRTLM
RQEIAFFDENHTGDIISRLSADTTQVSDLISNNINVFLRSIVKSVGFFIFMFGMSWKLTL
VTIMGFPFIAVVSKLYGDYYKKLTKEVQTTLAEANKVAEETISSMRTVRSFANEEGEADT
YLNKLLVMFQLNKKQALAYAGYMWSSCISELALEIAVLYYGGHLVVSGQMSSGSLISFFI
YMLELGECLESIASVYTGLMQGVGAAEKVFEYLDREPKHRADGTEAPDTCSGLVEFKDIT
FAYPTRPDTDILKGVSFMLRPGEVTAIVGPSGSGKSSCVSLLENFYRPQRGEVLLDGKPV
HTYQHDYLHSKIGLVGQEPVLFARTVEENITYGLSDVSMEAVEQAATKANAHEFISCLPT
GYQTSVGEKGTQLSGGQKQRVAIARALVRNPRVLILDEATSALDADSEHIVQTALNSIMQ
DHTVLVIAHRLSTVEKADNIIVIESGRVAEQGSHSRLMASEGLYFKLVQRQVLGIDTGAE
VLNPTQELSWKSDRGQRIRRRRKSSSSSSSEAERNMRY
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggattttcagagaaagattacaaatatatgtctggttttcaatcgaccatcagcatg
ggcgttaaagtatcactgatcgtcgcggtgctcttcatcctcctggacctcatcctcacc
accgtcctcttcacacaaggctctcactggagcgtcttcagggaggaggcgctgaacttt
gacctcctgagttcggtgttggacctgtgggggtgcgtgctgctgcggggccccctgctg
ctgggagcctgcatcggggtgtcctggaacaaacaagatggccccccgagggtctccaca
ctctccacccccatgctgctcctctgcctcgtcatcatcaccttcgccctggccaagatg
ctgatgctgtccgagcaggagccgctaacccagcagccctggtgtctgagcctcatctgc
tggacctgcgtctcctctctgctcgtggtgctgatctggaatcagatcgggaagaaggag
gcggggaagagtccagacagaagcagcagaagaggatgtgaggacactgagaagctggtg
ggaagagctgaggaggagagtgagaggaagaaggaggaagaggagatgaagagtggatct
ggggcgacactgggacgtctgctatcttactgcaggaaggacggagggctgatgtctgtc
gccgtcctcttcctcctcgtctccgctgtgtgtgaggccttcatcccgtactactacggg
aaagcgatcgacagcatcgtggtgcaccagagcatggagtacttcgctaaacctgtgatc
actctgtcagcgctcgctttagtcagttctcttgcaatgggagtacgtggaggagtcttc
acgctgatgtttggcaaattaaaccttcgtctcaggaaccatctcttcaggacgctgatg
aggcaggaaatcgccttttttgatgaaaaccatacaggggacattatttcccgtctgtcg
gcggacaccacacaagtgagcgacctgatctccaacaatatcaacgtgttcctgcggagc
atcgttaagagcgtcggcttcttcatcttcatgtttgggatgtcctggaagctcacattg
gtcaccatcatgggatttcccttcatcgctgtcgtctccaaactctatggagattactac
aagaaattgaccaaagaggtgcaaacaacccttgcagaggcgaataaagttgcagaggaa
actatttcgtcaatgaggacggttcgcagcttcgctaacgaggagggggaggccgacacg
taccttaacaaactcctggtcatgttccagctcaacaaaaaacaagcgctggcctacgct
gggtacatgtggtcgagctgtatctcggagcttgctttggagatagccgtcctctactat
ggcggccatcttgtcgtcagcgggcagatgagcagcggttctttaatatcgttttttata
tacatgctggaactgggcgaatgtctcgagagcattgcctcggtgtacacggggctcatg
cagggagtcggagcggcagagaaagtgtttgagtatctggaccgggaacccaaacaccgg
gctgacggcaccgaggctccggacacctgctcgggtctggtggagttcaaagacatcacg
tttgcatacccgacacgccccgataccgatattctcaagggggtgtcgttcatgctacgt
cccggcgaggtgacggccatcgtggggccctcgggcagcgggaagagctcctgtgtgagt
ctgctggaaaacttctaccgtccgcagagaggagaagttctgctggacggaaaacctgtt
cacacctatcagcacgactacctgcactccaagatcggtctggtgggccaggagccggtg
ctgtttgctcggacggtggaggagaacatcacctacggcctcagcgacgtctccatggag
gccgtggagcaggcggccaccaaggctaacgctcacgagttcatcagctgcctccctaca
ggctaccagacaagtgttggagagaaaggcacccagctgtcgggggggcagaagcagagg
gtggccattgcaagagcgctggtcagaaaccctcgagtcctcatcctggacgaggccacc
agcgctctggacgcagacagcgaacacatcgtgcagacggctctgaacagcatcatgcag
gaccacacggtgctggtgatcgcccatcggctcagcacggtggagaaggcggacaacatc
atcgtcatcgagagcggccgcgtggccgagcaggggtcccacagccggctgatggccagc
gaggggctttacttcaagctggtgcagcggcaggttctgggcatcgacacgggggccgag
gtcctcaacccaacgcaggagctcagctggaaatctgacagaggacagaggattaggagg
aggaggaagagcagcagcagcagcagcagcgaggcggagagaaacatgcgctactga
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