Pseudochaenichthys georgianus (South Georgia icefish): 117452272
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Entry
117452272 CDS
T09629
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117452272 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgeo03009
]
117452272 (utp15)
Ribosome biogenesis [BR:
pgeo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117452272 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_RFWD3
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_IFT122_2nd
Beta-prop_NWD2_C
EACC1
WD40_like
Motif
Other DBs
NCBI-GeneID:
117452272
NCBI-ProteinID:
XP_033946669
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Position
9:complement(21338275..21345412)
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AA seq
528 aa
AA seq
DB search
MASFKPTKVQVYPKLGEKVTQDTLYWKNYKAPLHIKEFGAITNIDFSPVAPHNFAVTAFT
RIHIYGPFSQEPVKSFTRFKDTAYCGRFRSDGQLLVAGCEDSVVRLFDVSGKVALRMFKG
HTKAVHVADFISDRYQILTGSDDYTCRLWDLPNATELNTYQEHTDYIRCGVASKLNRDLF
ITGSYDHTLKLFDARVDKSVMTMDHGQPVESLLLYPSEGLLVSAGGRNVKVWDLLKGGQP
LVSLKNHHKTVTSLCLSSSGQRLLSASLDRHVKVYNTTNYKVVHNFDYAASILSLALAPD
DESIVVGMTNSILSVKHRKSLEDSKEISGQQRRRPSYRVFVKGKNPVPKRDDYLVSKPVK
QHLAKYDKQLKKFNVTKALDTALETWTRHRKPEITVAVMKELDRRGTLKNALAGRDEQAL
ARLLNFLIGNVVDPRFAPVLVTAAEMILDIYRSVIGQSPVVDRQLLRLQELLEKEIDYQQ
DLLEVMGMLDTMFASSFPRMEVPCPGISRANGLAGGDGITSRPQIQAT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttaaacctaccaaagtccaagtctatcctaaacttggagagaaagtcaca
caggacacactctactggaaaaactacaaggctccgctccacataaaagaatttggagca
atcacaaatatagacttctccccagtggccccacacaactttgctgtgacagcattcaca
aggatccacatttacgggccattctcccaggagcctgtgaagtcatttacacgttttaag
gacactgcatactgtggcaggttcaggtcagacggtcagctgctcgtggcgggatgtgag
gactcagtggtccggctgtttgatgtcagcggcaaggtggctctcagaatgttcaaaggg
cacacaaaggctgtacatgttgcagactttatctcagaccgttaccagatcctcacaggg
tcagacgactacacgtgtcgactttgggacctcccaaatgccactgagctcaacacctac
caagaacacacagattacattcgctgtggcgttgccagcaaactcaacagagatctcttc
atcactggatcttatgaccacacactaaaactgtttgatgccagagtggataagagtgtg
atgaccatggaccacggccaaccagtggagagtctgcttctctatccttctgagggactc
ctcgtctctgcaggtggccgcaatgtgaaagtatgggatctgctgaagggaggccagcct
ctggtgtccttgaagaaccatcacaaaactgtcacgtctttgtgtctcagcagcagcggc
cagcgactgctgtcagcttctctggacaggcatgtaaaggtgtacaacacaaccaactac
aaagtggtccacaactttgactacgctgcctccatcctcagtctggctctggctccggat
gatgaatcaattgttgtgggtatgaccaatagtatcctgagtgtcaaacacaggaaaagc
cttgaagattcgaaggaaatctctggccaacagaggcggcggccatcgtatcgtgttttt
gtgaaggggaagaaccctgtccctaaacgggatgattatctcgtcagcaagccagtgaaa
cagcatctggccaaatacgacaagcagctcaagaaatttaatgtcacaaaggctttggat
acagctctggagacatggaccagacaccgaaagccagagatcacagtggctgttatgaag
gagctggatcgaagggggacgttgaagaacgctctggcaggaagggatgaacaagccctc
gctcggttgctaaactttctcattgggaacgtggttgaccccaggtttgctcctgtcctg
gtgacagcggcagagatgatcctggacatctatcggtcggttatcggacagtctccagtc
gtggaccgacagctgctgcgtctgcaggagctgctggagaaagagatcgactaccagcag
gacctcctggaggtgatgggcatgttggacacgatgttcgcctcctcctttcccaggatg
gaggttccgtgccctggcatcagcagggctaatggcctggccgggggagacgggattacc
tcgagaccacagattcaggctacctga
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