Pseudochaenichthys georgianus (South Georgia icefish): 117452353
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Entry
117452353 CDS
T09629
Name
(RefSeq) tubulin alpha-1C chain-like
KO
K07374
tubulin alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04145
Phagosome
pgeo04210
Apoptosis
pgeo04530
Tight junction
pgeo04540
Gap junction
pgeo04814
Motor proteins
pgeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117452353
09143 Cell growth and death
04210 Apoptosis
117452353
09144 Cellular community - eukaryotes
04530 Tight junction
117452353
04540 Gap junction
117452353
09142 Cell motility
04814 Motor proteins
117452353
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117452353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117452353
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117452353
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117452353
04147 Exosome [BR:
pgeo04147
]
117452353
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117452353
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117452353
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117452353
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117452353
Exosomal proteins of other body fluids (saliva and urine)
117452353
Exosomal proteins of colorectal cancer cells
117452353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117452353
NCBI-ProteinID:
XP_033946818
LinkDB
All DBs
Position
9:complement(9675296..9678408)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECLSIHVGQAGVQIGNSCWELYCLEHGIQPDGRKPGDQNISGGGGDDSFNTFFMETGA
GKHVPRAVFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKELIDTV
MDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVS
TAVVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICCRKLDIERPSYTNLNRLMSQIVSSI
TASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISTEKAYHEQLSVAEITNSCFEP
ANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYE
PPTVVPGGDLAKVQRALCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEF
SEAREDMAALEKDYEEVGADSPGDDEDEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgcctctcaatccacgttggtcaggctggtgtgcagattggcaattcctgc
tgggagctttactgcctggaacatgggatccagccggacggcaggaagccaggtgaccag
aacatctcaggaggaggaggtgacgattccttcaacaccttcttcatggagactggagct
ggaaagcacgtccccagagcagtgtttgttgacctggagcccactgtcatcgatgaggtg
cgcacggggatttaccgccagctgttccaccctgagcagctgatcactggcaaggaggat
gctgccaacaactacgcccgaggacactacaccatcggcaaggagctcattgacacagtg
atggacagaatccgaaagctgtccgaccagtgcactggtcttcagggtttcctggtgttc
cacagcttcggagggggcaccggctctggcttcacctccctgctgatggagcgtctgtcc
gtcgactacggcaagaagtccaaactggagttctccgtctacccggctccccaagtgtcc
actgctgtggtggagccctacaacgccatcctgaccacgcacaccaccctggagcactct
gactgtgccttcatggttgacaacgaggccatttatgatatctgctgtagaaagctcgat
atcgagcgtccctcttacaccaacctgaacaggttaatgagtcaaattgtgtcctccatc
actgcctcccttcgctttgatggtgccctcaatgttgatctgacagagttccagaccaac
ttggtgccctatccccgtatccacttccctctggccacctatgcccctgtcatctccacg
gaaaaagcgtaccacgagcagctctcggtggcagaaatcactaattcctgcttcgagcca
gccaatcagatggtgaaatgcgacccacgccacggtaaatacatggcctgctgccttttg
tatcgtggtgatgtcgttcccaaagacgtgaacgctgccattgccaccatcaaaaccaag
cgctccatccagtttgtggactggtgccccacgggtttcaaggtgggcatcaactacgag
ccgcccactgtagttcctggtggagacctggccaaggtccagagggctttgtgcatgctg
agcaacaccactgctattgcagaggcctgggctcggctggaccacaagtttgatctgatg
tacgctaagcgtgcctttgtgcactggtatgtgggtgagggtatggaggagggagagttc
tctgaggccagggaggacatggccgctctggagaaagattacgaggaggttggagctgat
agtccgggagatgatgaggatgaggagtattag
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