Pseudochaenichthys georgianus (South Georgia icefish): 117452380
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Entry
117452380 CDS
T09629
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117452380
Cilium and associated proteins [BR:
pgeo03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
117452380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_16
TPR_17
RPN7
TPR_11
TPR_14
TPR_9
TPR_19
TPR_NPHP3
TPR_6
PUB
BTAD
ARM_TT21_5th
HlyE
DUF4698
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
117452380
NCBI-ProteinID:
XP_033946865
LinkDB
All DBs
Position
9:complement(30369976..30560923)
Genome browser
AA seq
2474 aa
AA seq
DB search
MEQQATLKEKFSIFGSRTAGRPIQCVSGDDGARCGLSKAEFMEKVQQSNEACQRGDFQAA
IHLYTNALQADPQNCILFSNRSAARLKLGQHQAALEDAEKACELNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMIEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTASHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFENAVQCH
EQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAY
AGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLAIAQELNDYAAQGRSYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFIKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVAGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDLPGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAMMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLAVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLTIARDTQDRILEGDASCGLGTIYQSMGEYETALRCHQSDLEIAEEAGSPARQA
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGMSEVGSDFQ
EGGNGGVVCGSSLEQYIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGTSSLPRRSSNLGKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIAIPSIQ
GLGSNAKTNSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPSAEEEAHMVAELLG
CQPLAGPAATKERVMSALSQAECAHFATHISWKLAALVLSPNPESVPGGSSASGGVGTLG
RGAGGKRGSSGRGRKGSGSGYTIPESLHMQDDNSDLESICDSPPLQEFLLTAADILDMRL
PVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGVQCTLVSLWPVPVAASKVFVHAFYTAM
LNGTKASAALADAMKNVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYPD
RARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSVG
TGMPCAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASEAGEQLINRAVKNM
VAMLHQVLVQLQTGEKEQDFSLQPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVL
KTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPMPMGYSSLP
FSPPYLDNQASDAISVYSLSSVASSMSFVSKTDCDFLGHRQRGGATAHYSIHKHPHVPRS
RSSPHGAAAAAVAGARGEDEEYEGFSIISSEPLGSHCDSLPLPPGHSQRHRGGRGVVGGS
STGAGRGYTVSVSSRGSVSTPTSPVKTCLVPSPNSPFQKVGKVSSSDTGESDQSSTETDS
TVKSQEEKAVPLDPQELAQKILEETQSHLRAVGSLQRAGPEGAAAVGTSVRSSAFRSSET
SAFSRPNSSASGRAQSSPRPKPPSRSSSLQKISSGYNSPAISESSQRDGSHPSPTLDSQF
RLKYPSSPYSNHISRSPSNVSPISGHLSPAGSAPSPALSYSSTGSTCSTSADIPDLDRLR
RGVIDEKVQAIHNLKTFWANAAAQHQSHLGPVRAVHGAPGPLASAGRDVLSLLNLSPRRC
SPNDNQDSLELRELGLQSLDRNNKNGHNFSNPRQVAPSPTISTSSSPGPRSIRLPAGNGY
KFLSPGRFFPSSKC
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaagcgactctgaaagaaaagttttccatattcggttctcggacagcgggc
agacctatacaatgtgtttctggagacgacggggccaggtgtgggctcagcaaagcagag
ttcatggagaaagtgcagcagagcaatgaggcgtgtcagcggggtgactttcaggcggcc
atccatttgtacaccaatgccttgcaggctgacccacagaactgcatcctgttcagtaac
cgctcagcagcccgcctcaaactgggacagcaccaggcggcactggaggatgctgaaaaa
gcctgcgagctcaatcccaagtggcccaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcactggccgcctttgcctccgggctggcccaagacccc
aagagcctgcagctgctagtgggcatgatagaagccgccatgaagtcgccgttacgagag
tctctggagcccacctatcagcagctgcaaaagatgaagctggacaaaagtccctttgtg
gtggtgtctgtgattggccaggagctgctgacagcgagccaccacacagcctctgttgtg
gtgctggaagccgctttgaagatcggcacatgcagcctcaagctccgcggctccgtcttc
tccgccctcagcagcgcccactggtccctgggcaacacagagaagagcactggctacatg
cagcaggacctggaggtggccaagaccttaggtgaccaaacaggggaatgccgcgctcat
ggcaatctgggctcggcattcttctccaagggaaactaccgcgaagcgctgaccaaccat
cgcaaccagctggttctggccatgaagctgaaggacagagaggctgcttcaatggcgctg
agcagcttgggccatgtatatacagccattggggactatcccaacgccctcgccagccac
aagcagtgtgtcctgctggccaagcagtccaaggatcagctgtctgaggctcgcgagctg
gggaacatgggggccgtctacatcgccatgggagactttgaaaatgctgtccaatgccac
gagcagcacctgggcatcgccaaggccctggaaaataaacgagaggaagctcgggcctat
agtaacctgggcagtgcctaccactaccaccgtaactttgacaaggccatgtcctaccat
actcatgttctggagctcgcccaggagctggaggaaaagtccattgagatgagagcctac
gcagggctgggtcatgctgctcgctgcatgcaggacttggagagggccaagcagtaccac
gaacagcagctgtctatagctgagggtctgaaggacagggccgccgaggggagggcctcc
tccaatctgggcatcatccaccagatgaagggagactatgagactgcactgaaacttcac
aaaacacacctggccattgctcaggagctgaatgactatgctgctcagggccggtcctat
ggcaacatgggtaacgcctacaatgccctgggagccttcgaccaggctgtccgataccac
cgccaggagctccagatttccatggaggtaaatgaccgggcctcgcaggcgtccacccat
ggaaacctggccgtggcttaccaagccctgggagcccatgaccgtgctctgcaacattac
cagaaccacctcaacattgctcgtgagctcagggatgtccagagcgaggcgcgggctctg
ggcaacctcggcaacttccactgctctcgaggagagttccctcaggctgtgccgtactat
gagcagtacctccgcttgtcccccgaccttcaagacatggagagcgaagggaaagtttgt
cacaatctgggttatgcccactactgtctgggcaactaccaggatgccgttaaatactat
gagcaggacttagctctggccaaggatcttcatgacaaactgagtcaggccaaggcttac
tgtaacctcggtttggcttttaaagcgctgggagacttcattaaggcagaggagtgtcag
aaatacctgctgtcactggcccagtccctgaacaatgcacaggctcgcttcagagctctg
gggaacctcggggacatatttgtctgtaaaaaagatgtggctggagccattcagttttac
gagcagcaactggccttagctcaccaggttaaggagcgtaggatggaggcatgtgcctat
gccgccctcggggccacctacagacttgtgcagaaatatgacaaagctctaggctaccac
acccaggagctggaggtctatcaagagctgggcgacttgccaggagagtgcaaagcccac
ggtcacctggcagctgtctacatggctctggggaaatacgccatggcctttaagagctac
gaggagcagttggagctaggtcgcaggctgaaggatcccgtagtggaggctcaagtgtac
gggaatatgggcatcactaaaatgaatgtaggcgtgatggaggaagctattggctatctg
gagcagcagctggccactttacagcagctgagtggcaacgaggccatgatggacaggggc
agggcctatggaaacctgggagactgttatgaggctttgggagactttgaggaagccatc
aagtattatgaccagtatctggctgtggcccagagcctcaaccgcatgcaggaccaggag
aaggcctacagaggcttaggcaatggacacagggccatgggaaacctacagcagtcgctt
gtgtgttttgagaagcgtctggtcgtggctcatgagctgggggagtgtggaggcaaggct
caggcctacggtgaactgggcgcactgcacagccagctgggaaattacgagcaggcgatt
tcctgtctggagcgtcagctgaccatcgcccgtgacacccaggaccggatcttagagggt
gacgccagctgcggtttgggcactatatatcaatctatgggagagtatgagacggccctg
cgatgccaccaaagtgacctggagattgcggaggaagcgggcagtcccgcgcgccaggcc
cgcgcctatgggaacttgggccttacctacgagtcgctcgggaactacgagcgggcggtg
gtgttccaggagcagcacctgagtgtggcggctcagactaatgacttggctgccaagaca
ctggcctatggcagcctggggaggacacaccacgcactgcaaaactactcacaggctgtc
atgtacctgcaggaaggcctgcggcttgcagagcagctggctcggcgtgaggacgaggcg
aagatccgccatcgtcttgggctctctctgtgggccagtgggaatctggaggaggcccaa
catcagctctaccgggcttctgcactgtttgagaccatccgccatgaagcccagcacagc
acagactataaactctccctgttcgacctgcaaacctcctgctaccaggcactccaaagg
gtcctcgtcagcctaggccaccacgatgaggctctggcggtggcggagcggggtcgcaca
cgagccttcgctgacctcctggtggagcggcagacaggccagcaggactcggacccctac
accccggtaacagtggagcacatattggacaccgtcaacagccagagggcgttggtgctt
tatttctcaatggcggctggctacctgtacagctggctgctggctccaggagcaggcatc
ctgaagtttcatgaggtgtatctgggcgagggcatgtcagaagtagggtctgacttccag
gaggggggcaacggaggggtggtttgcggctcctcgctggagcagtacatcgctagtgcc
cgtgaagctctgggagttgagtcgtattacagcagagggtgctcaagcagcgagacagag
agcgaggcaggagatttgttggaccaacaatttgaggagctcaacaacaagcttaactct
gtcaccgatccaacgggcttcctgcgcatggtgtccagaaacaacctgttcaacaggagc
tgccagagtatgaccagcctgttcagtaacaccatgtcacccgccaaagacggtacttct
tccctgcctcgtcgctccagcaacctcggaaagcctccactccgggcactttatgatttg
ctcattgcacctatggaggggggcttgatgcactccagtgggccagttggcagacacaga
caactggtgatggtgctggagggagaactgtacctcatccccttcgctctgttaaaagga
agctcctctaatgaatacctctatgagcgcttcagcctcatcgccattccctccattcaa
ggcctcggatcaaatgcaaagacaaactcccggcgccctggaccagctccttgtggaggt
gtctccatggcagcagtggtggggaacccccgcctgccctcacctgtcatggaccgctgg
ctgtggggacccatgccctctgcagaagaggaggctcacatggtggcagagctgctgggc
tgccaacccctggctggccctgctgctaccaaggaaagggtgatgagcgccctctcacag
gctgagtgtgctcactttgccacccacatttcctggaaattagcagctctggtgctctcc
ccgaaccctgagagcgtgcctggtgggtcgagtgccagtgggggtgtaggaacattgggg
agaggggccgggggaaagagaggcagcagtggtcgaggcaggaagggctccggaagcggc
tacaccatccccgagtccctccacatgcaggatgacaacagtgacctggagagcatatgt
gatagtcccccgctgcaggagttcctgctcacagctgcagatatactggacatgaggttg
ccagtcaaactggtggtgcttgggtcgtaccaggagtccagcagtaaagtgactgcagat
ggtgttgtgggattgacccgggccttcctggctgccggggtgcagtgtactctcgtgtcc
ttgtggcctgtccctgtcgcagcctccaaagtttttgtccatgctttttacactgccatg
cttaatgggaccaaagctagtgcagcactggcagatgccatgaagaatgtccagagcagc
aagcagtactcgcacccctccaactgggcaggatacatgctgattggaaatgatgtgaag
cttaacagtccctcttccctcattggccaagctttggcagagattctacagtatccagat
cgagcacgagatgctctgagagttttactccacctggtggagaagtctcttcagaggata
cagaacggccagcggaactccatgtatacatcccagcaaagtgttgagaacaaggtgggg
ggggtccctggctggcaggctctgttgacagccgtgggcttccgtcttgactctgtgggc
actggtatgccctgtgccgtctttttccctactgcggatccaggagacaggctccagcag
tgcagcaccaccttacaatcactgctgggtctgccaccgccagctctccaggctttgtgc
aaactcatcacagcttcagaggcaggggagcagctcatcaatcgggctgttaaaaatatg
gtggcaatgctccatcaggtgctagtccaactacagacaggagaaaaagaacaggatttc
tccctccagcccattcaggtgtccatcagtgtgcagctatggaggctgccaggatgccat
gaatttctggctgctcttggatttgacttatgtgaggtaggccaagaagaagtggtgcta
aagacaggcaagctagccaaccgccgcaccttgcactttgctctccagtctctgctggcg
ctgtttgactccacagaactgcccaagcgtctaagcctggatagctcatcttcccttgag
tctctagcttcagcccagtctgtgtctaaccccatgcccatgggatactcaagccttcct
ttctctcctccttacctggacaatcaggcctcagatgccatctctgtgtatagcctcagc
tctgtagcctcctccatgagctttgtttccaagacagattgtgatttccttggtcatcgg
cagcgcggtggggccacagcgcactactctatccacaaacaccctcatgtcccccgcagt
cgctcgtctcctcacggggcagctgcagcagcagtggctggagcccggggggaagatgag
gaatatgagggtttttctattatcagcagcgagccactgggaagccactgtgactctctg
cccctgcccccaggccacagccagcgccaccgtggaggcaggggggttgttggtggatcc
agcacaggagcagggagaggctacactgtatcagtatcatcaaggggcagtgtcagcacc
cccacatcccccgttaaaacatgcctggtgcccagcccaaactcaccattccagaaggtg
ggaaaggtgagcagctcagatacaggtgaatcggaccagtccagtaccgagacggacagc
actgtcaagtctcaggaagaaaaagctgtccctttggaccctcaggagctggcacagaag
attctggaggaaactcagagccatctacgggctgtgggtagtcttcagcgggccgggcca
gagggtgcagcagctgtaggaacctcagtgcgaagcagcgccttccgctcttctgaaact
agtgcgttcagccgtcctaacagcagtgctagtggccgagctcaatcttcccccagaccc
aaacctccctcccgttcctcttctcttcagaaaataagctctggctacaacagtcccgca
atctctgagtcttcccaaagggatggcagccatccttcgcccactctggacagccagttc
agattgaagtacccaagttctccatacagcaaccacatctctcgctctccgagtaatgtg
tctcccatttcaggtcacctttccccggcaggaagtgctccatcgcctgccctgtcgtac
tcctctacaggctctacttgctctacttcggctgatatacctgacttggaccggctacga
agaggggtcattgatgaaaaagtccaagctattcacaatctgaagaccttttgggctaac
gctgcagcccagcaccagtcacacctaggtcctgtcagagctgtccacggtgctcctggc
cctcttgcttctgctggcagggatgtactgagccttctgaacctctctccacgtcgttgc
tcccctaatgataaccaagacagcctggagctgcgggagctggggctgcagtcactagat
aggaacaacaagaatggacacaacttctccaaccctagacaagtggccccgtcacctaca
atttccacaagcagtagccctggtcctcgttctatccgactacctgctggcaatggatac
aagttcctgtcgcctgggagatttttcccttcctctaaatgctga
DBGET
integrated database retrieval system
