Pseudochaenichthys georgianus (South Georgia icefish): 117452399
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Entry
117452399 CDS
T09629
Symbol
hira
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117452399 (hira)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117452399 (hira)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_IFT140_1st
WDR55
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
HIRA_B
Beta-prop_EIPR1
WD40_like
Motif
Other DBs
NCBI-GeneID:
117452399
NCBI-ProteinID:
XP_033946899
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All DBs
Position
9:complement(8570125..8611727)
Genome browser
AA seq
1017 aa
AA seq
DB search
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVMIWNMAPVLREEDEKNENIP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWKRAAFIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEMVTCLRGHTGLVKGL
TWDPVGKYIASQADDHSLRVWRTMDWQMEANVTKPFSECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIVERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSAQKPGCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLTGLGMLVCSMDGTVAYLDFSLD
ELGDPLNEEEKNSIHQNIYGKSLAITSTEAQLSTTIIENPEMLKYQQERQNSIQANSGLG
SAGPESSAPKLNSMMNGESLEDIRKTLLKKQVETRTADGRRRITPLCIAQLDTGDFSPAL
FNSAPILPSGSSMSNQLTSQLSSDSSPGQASSLGLRPIHDPMLTSPPPNSATKGLEDGLK
SSLLLTSASKIEPMKALDSRFTERSKATTGVTAVISSISGLMPLDSRPKDGLSSLKDLKS
KDDTSSDSEDKMASINKNLMLGKRKPELLIDAGEVVEKRKKGRPRKDKMAAPTAQPFPQM
TLSAEREPSRVAAPPPPVAALKLPTPSIKKTFSLQVSMEPSMFLEVENEVSVVAGSKLSQ
LRCSRDGRDWNTLLPSSVITAAGSSDILAVACQDRMLSVFSSCGRRLLPAIQLATPVSAL
HCSAHFVMALTAGAALSVWDVHKQKALVKNESLLSILPGADTTVSQSLLTQQGVPVVGLS
NGKSYCFSSSLETWTLIADKGDSMVQCADFRSCLPTQDAPVSSGPLAVMQGRNLNAGRLA
SRLSSTPHHLQQSMTLAFLENQLASALTLQSAQEYRYWLLIYTRFLVNEGSEFRLRELCK
ELLGPVHKSAATAWEPTTLGLRKRELLREVLPVIVENLRFQRLFTEYQDQLELLRNK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaagccgagctgggtgagccacaacggcaagcccatattttccgttgac
atccaccctgatgggacaaaatttgcaaccgggggccaaggagaggattcgggcaaggtg
atgatctggaacatggcgccagtccttagagaggaggatgagaagaatgagaatattccc
aaaatgctttgccagatggataatcacctagcttgtgtgaactgtgtgcgctggtccaac
aacgggctgtacctggcatcaggaggagacgacaagctggtcatggtgtggaagagagct
gcattcatcggtccgagcacagtgttcgggtcgagcagtaagctggccaacgtggagcag
tggaggtgtgtcaccatcctgaggaaccacaccggagatgtgatggacgtggcgtggtct
cctcatgacgtgtggctggcctcctgcagcgtggacaacaccatcgtcatctggaacgct
cgcaaatttccagagatggtgacatgtctgcgaggacacactgggctggttaaaggtctg
acgtgggacccggtggggaaatacatcgcctcccaggccgacgaccacagcctcagagtg
tggaggacaatggactggcagatggaggccaacgtcaccaaacccttcagcgagtgtggt
gggacgacccacgtcctgcgtctgtcctggtctccagacggtcagtatctggtgtcggct
cacgccatgaacaactccgggcccaccgctcagatcgtggagagagatggctggaaaacg
aatatggacttcgtcggccaccgtaaagctgtcacggtggtgaaatttaacccaaagatc
tttaagaagaagcagaaaaacggcagcgctcaaaaacccgggtgtccgtactgctgctgc
gctgtcggcagcaaagaccggtcgctctccgtctggctgacctctctgaagcgccctctg
gtggtcatccatgatctgtttgataaatcgattatggacatatcctggactctgacaggt
ctggggatgttggtgtgttcgatggacggcactgtggcctacctggacttctcactggat
gaactgggagacccgctaaacgaggaggagaagaacagcatccatcagaacatctacggt
aagagtctggctataaccagcacagaggctcagctctccaccaccatcatcgagaaccct
gagatgctcaaataccagcaggagcgccagaactcaatccaggccaactcagggctgggc
agcgccgggcctgaatcctcggcccctaagctcaacagcatgatgaacggagagtctctc
gaggacatcaggaagaccctcctgaagaaacaggttgagacgagaactgcagacggacga
agacgaatcacaccgctctgcattgctcagctggacaccggggatttctctcccgccctg
ttcaacagcgctcccatcctgccgtcgggctcctccatgtccaaccagctcacctcccag
ctcagctcagactccagccccggacaggcctcttctctggggcttcggcccatccacgac
cccatgctcacctcgcctccacccaacagcgccacaaagggcctggaggacggtctgaag
tccagtctgctgctcacttctgcctccaagatcgagccgatgaaagctttggactcgagg
ttcacggagaggtcaaaggccacaacgggggtcacggccgtcatatcctccatctctgga
ctcatgcctctggacagcaggcccaaagacggcctgtcctctctgaaagacttgaaatcc
aaagacgacaccagcagcgacagcgaagacaaaatggcctcgatcaacaaaaacctgatg
ttgggcaagaggaaacccgagctgctgatcgatgcaggagaggtggtggagaagaggaag
aagggacggcccaggaaagacaagatggctgcacccaccgcccaaccattccctcagatg
actctcagcgcagagcgggagccaagcagggtggcagcgcctccccctcctgtcgctgct
ctcaaactgccaacacccagtataaagaagaccttcagtctgcaggtaagcatggagcca
tctatgttcctggaggtggagaacgaggtgtcggtagttgcgggttcaaagctcagccag
ctgcgatgctccagagacggacgggactggaacacactgctgcctagctcagtgatcact
gctgcggggagcagtgacatcctcgccgttgcctgtcaggacaggatgttgtcagtgttc
tcttcctgtgggcggcggctgcttcctgccattcagctggccacgcctgtgtcagctctg
cactgctcggcccactttgtcatggctctgacggctggggctgcgctgtctgtctgggat
gttcataaacaaaaggctctggtgaagaacgagtctctgctgagcattttaccaggtgct
gacaccacagtgtctcagtctctgctgacccagcagggcgttccagtcgttggactctcc
aacggaaagtcctactgcttcagctcctcactggagacatggacgttaatagcggataaa
ggagactctatggtccagtgtgctgacttcaggagctgcctacctacccaggatgcacct
gtgtcctcagggccactggctgtcatgcagggacgcaacctcaatgctggtcggctggcg
tcccgcctctcctccacccctcaccacctgcagcagagcatgacgttggccttcctggag
aatcagctggcgtctgctctgactttgcagtcagcacaggagtatcgctactggctgctc
atctacacccgtttccttgtcaacgaaggttcagagtttcgtctccgagaactctgcaag
gagctgctcggtcccgtccacaaatcagcagcgacagcctgggagcccaccactctgggt
ctacgtaagcgcgagttgttgcgggaagtcttacctgtcatcgttgaaaacctgcgattc
cagagactattcaccgaataccaggaccagctggagctactgcgcaacaaataa
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integrated database retrieval system
