Pseudochaenichthys georgianus (South Georgia icefish): 117452441
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Entry
117452441 CDS
T09629
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117452441 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgeo01007
]
117452441 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgeo03016
]
117452441 (tars1)
Enzymes [BR:
pgeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
117452441 (tars1)
Amino acid related enzymes [BR:
pgeo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117452441 (tars1)
Transfer RNA biogenesis [BR:
pgeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117452441 (tars1)
Prokaryotic type
117452441 (tars1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
117452441
NCBI-ProteinID:
XP_033946969
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All DBs
Position
9:complement(20185620..20205995)
Genome browser
AA seq
725 aa
AA seq
DB search
MADQAVVEKMSEMQVDEKKKGGTEGGKDGGKKKAKNAVGQSAGRAELTPAPEYIDKRLSL
YTKLKAEHDALMAERAAKDSRAIKVTLPDGKVVDAESWKTTPYQVACGISQGLADNTVIA
KVNNGVWDLDRPLEEDCSLQLLKFDDEEAQAVYWHSSAHILGEAMEKVYGGCLCYGPPIE
SGFYYDMFLESTADGVSSNDFPGLETLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCR
ILNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIY
GISFPDPKMLKEWEKFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAFIYNSLIE
FIQSEYRKRGFQQVVTPNIYNSKLWQTSGHWQHYSENMFSFEVEKETFALKPMNCPGHCL
MFDHRPRSWRELPIRMADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCTMDQIEEEIKG
CLDFLRTVYNVFGFSFKLNLSTRPEKYLGEPEVWEQAEKQLENSLNEFGEKWVLNPGDGA
FYGPKIDIEIKDAIGRYHQCATIQLDFQLPIRFNLTYVGHDSDDKKRPVIIHRAILGSVE
RMIAILTENYGGKWPLWLSPNQVMVVPVGPTCEEYAQKVKQEFHSNGFMSEVDLDPGCTL
NKKIRNAQLAQYNFILVVGEKEKTSNTVNVRTRDNKVHGERTVEECIERLQQLKTCKSRN
AEEDF
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaggccgtcgtggagaaaatgagcgagatgcaagtggacgagaaaaaaaag
ggggggactgaaggcggtaaagatggaggaaagaaaaaggctaaaaatgctgttgggcaa
tctgcaggcagggccgagcttacaccagcccccgagtacatagacaagcgtctttctttg
tacaccaagctgaaagccgagcatgacgctctgatggctgagagggctgcgaaggacagc
cgggccatcaaggtgactctgcctgatgggaaagtggtggatgccgaatcctggaagact
acaccataccaggtggcctgtggaatcagtcaaggccttgctgacaacacagtgattgct
aaagtgaataacggtgtgtgggatctggaccgaccattggaggaggactgcagccttcag
ttgctgaagtttgatgatgaggaggctcaagctgtttactggcactccagcgcacatatc
ctgggtgaagccatggagaaggtgtatggaggctgcctgtgctacggcccccccatcgag
agcggcttctactacgacatgttcttggagagcactgctgatggtgtttcaagcaatgac
ttcccaggactggagaccttgtgcaagaaaattatcaaggagaagcagccctttgagagg
ctggagataaagaaggaaactctgttggaaatgttcaagtacaacaagttcaagtgccgc
attctcaatgagaaggtgactactcccaccaccacagtgtacaggtgtggtcccctgatt
gacttgtgtcgcgggcctcatgtgagacatacagggaaaatcaaggcccttaagatccac
aagaattcatctacatactgggagggtaaggcggacatggaaaccctccagaggatctac
ggaatctccttccctgaccccaaaatgctcaaagaatgggagaagtttcaagaggaagcc
aagaacagagatcaccgcaaactgggccgggagcaagacttgttcttcttccatgacctg
agtccagggagctgcttcttcctgcctaagggggccttcatctacaacagcctgattgag
ttcatccaaagtgagtacaggaagaggggtttccagcaggtggtgacgcccaacatctac
aacagtaagctgtggcagacctccggccactggcagcactacagcgagaacatgttctcc
ttcgaggtggagaaggagaccttcgccctcaaacccatgaactgcccgggacactgtctg
atgttcgatcaccgaccacgctcctggagagagcttcccattcgcatggccgacttcggc
gtgctgcacaggaacgagctgtcaggcacgctgacaggcctcacccgggttcgccgcttc
cagcaggatgatgctcatatcttctgcaccatggaccagattgaggaagagatcaaaggc
tgcctggacttcctgcgcactgtgtacaacgtgtttggcttctctttcaaactcaacctc
tccacaagaccagagaagtacctgggagagccggaggtctgggaacaagcagaaaagcaa
ctggagaacagcttgaatgagtttggggagaaatgggttctgaaccccggtgatggagct
ttttatggaccaaagattgacattgagatcaaggatgccatcggccgctaccatcagtgt
gccacaattcagctggacttccagctgccgatccgcttcaacctcacctacgtcggccat
gatagtgacgacaagaagagaccagtgatcatccacagagctatcctgggatcggttgag
aggatgatcgccattctgactgaaaactacggcggcaaatggcctctgtggctctctcct
aaccaggtgatggtggtgcctgtgggaccgacctgtgaggagtacgctcagaaggtgaag
caggagttccacagcaacggcttcatgtctgaggtggacctggaccccggctgcactctg
aacaagaagatcagaaatgctcagttggcgcagtacaacttcatcctggtggtgggagag
aaggagaagacgagcaacactgtaaatgtgcgcacccgggacaacaaagtgcacggcgag
cgcactgtggaggagtgcatcgagcgtctgcagcagctgaagacctgcaagagccggaac
gctgaggaggacttctga
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