Pseudochaenichthys georgianus (South Georgia icefish): 117452445
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Entry
117452445 CDS
T09629
Symbol
trim36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117452445 (trim36)
04121 Ubiquitin system [BR:
pgeo04121
]
117452445 (trim36)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117452445 (trim36)
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
117452445 (trim36)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117452445 (trim36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
zf-B_box
zf-RING_UBOX
ANCHR-like_BBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
Cdh1_DBD_1
DUF1826
Motif
Other DBs
NCBI-GeneID:
117452445
NCBI-ProteinID:
XP_033946973
LinkDB
All DBs
Position
9:complement(27394611..27422941)
Genome browser
AA seq
750 aa
AA seq
DB search
MSDSEDMAEFASIVERIERGEVPIKNIERELICPICKELFTHPLILPCQHSVCHKCVREL
LMLNHEDSFDAGSECSMPGSPRSRVPSPSMERLDRLVRSGGSRGSISSPGWRRGSVTPRV
TTIPCPGCQHDIDLGERGISMLFRNFTLENIVERYRQAARAAVAIMCNICKPPQQQEATK
SCMDCKASYCNECFKLHHPWGTPKAQHEYVGPTTNFRPKVLMCPEHEMEKVNMYCEVCKR
PVCHLCKLGGSHANHKVTSMGSAYKILKEKLAKSIHYLISKEDQVRAQITDLDLLINQTE
DNGQLAERQANEHFERLFETLQERKSEMLKSIEQSRNRRLDQLKVQVEEYQGMLENSGLV
GYAQEVLKETDHSCFVQTAKQLHTRIQKATESLRTFHPASDPCFDEFVLDTSREETLLKE
MCFGGVPDPPLIDLSTSRVYNEASICWRLSDDHLPTDHHVMEYRRLGGQSPSQEDGEDSG
AWRATDKVYGPNTVVCDLEPDSLFSFRVKSCRNSMFSPHSPEVTFHTPPAPAFGFLFSDK
CGFSTERLILNNRRDTVESVASMAFLLAAERVQTGSFIGLDYIIGDMGISQGRHYWAFKV
EPYSYMVKFGVASDSKLLEWFHNPRDTSSPRYDHDSGHDSGSEDTCYELSQPFTLLTLGM
GKLFIPKTSSVSTAHAASSDPGNRVLPLPQRIGVCLDYDACRVYFYDADTMRCLYERQVD
CSGTMYPAFGLMGSGKIQLEEFITAKRLTF
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcagaggacatggcggagttcgccagcatcgtggagcggatcgagcggggc
gaggtcccgatcaagaacatcgagagggagctgatctgcccgatctgtaaggagctcttc
acccacccgctgatcctgccctgccagcacagcgtctgccacaagtgtgtcagagagctt
ctcatgctcaaccatgaggactcttttgatgccgggtccgagtgctcaatgccgggcagc
ccaaggtccagggtgccctccccgtccatggagaggctagacaggcttgtgagatcaggt
gggtctcggggctccatctcgtcaccggggtggcgcagagggtctgtgactccccgggtc
accaccatcccatgcccaggctgccagcatgacatcgacctcggagagcgaggcatcagc
atgttgttccgtaacttcacgctggagaacattgtcgagcgctaccgccaggccgcccgt
gcagccgtcgcgatcatgtgtaacatctgtaagcctccgcagcagcaggaggccaccaag
agctgcatggactgcaaggccagctactgcaacgagtgcttcaagctgcaccacccctgg
ggcacgcccaaagctcagcatgagtatgtcgggcccaccacaaacttcaggcccaaggtc
ctcatgtgtccagagcatgagatggagaaggtgaacatgtactgtgaggtctgcaaacga
ccagtgtgtcacctctgtaaactgggaggatcccacgccaaccacaaagtcacctccatg
ggcagtgcctacaagatcctcaaggagaagctagccaagagtatccattacctcatcagc
aaagaggaccaggtcagggctcagattactgatctggatctgctcatcaatcagaccgag
gacaatggacagctagcagagcgccaagccaatgagcactttgagcgtctgtttgagact
ctgcaggagaggaagtctgagatgctgaagtccatcgagcagtctagaaaccgacgcctg
gaccaactcaaagttcaggtggaggagtaccagggcatgctggagaacagcggtctagtg
ggctacgctcaggaggttctgaaagagacggatcactcctgctttgtacagactgcaaag
cagctgcacaccaggatccagaaggccacagagtctctgaggactttccaccctgcgtct
gatccctgctttgatgagtttgtgctggacacatccagagaggaaacgctgctcaaagag
atgtgctttggaggagttccagaccctcccctgattgacctgtccactagcagggtctat
aacgaggcctcgatctgctggaggctgtctgatgaccacctccccacagatcaccacgtg
atggagtatcgcagactgggcggccagtccccgtcccaggaggacggggaggacagtggg
gcctggagggctacagacaaggtgtatggtcccaacactgtggtgtgtgacctggagcct
gacagcctgttctccttcagggtcaaaagctgcaggaactccatgttcagcccccacagc
cctgaggtcaccttccacaccccccctgcacctgcttttggtttcctgttcagcgacaaa
tgtggcttcagcacggagcggctaattctcaacaaccgccgggacactgtggagagcgta
gctagcatggccttcctcctggctgcagagcgtgtgcagacgggcagcttcatcggactg
gactacatcattggggacatgggcatctctcagggaagacactattgggccttcaaggtg
gagccgtactcctacatggttaaatttggagtggcgtctgactcgaagcttctcgaatgg
tttcacaatccgagagataccagcagcccaaggtatgaccatgacagtgggcatgacagc
ggcagtgaggacacatgctatgagctctcccagcccttcaccctcctcaccctgggcatg
ggcaaactcttcatccccaagacgtcctctgtctccacagcacatgcagcgtccagcgac
cctggcaaccgcgtgctccccttgccacagcgcatcggtgtatgccttgattacgacgcg
tgccgggtgtatttttatgatgccgacaccatgaggtgcctttatgagaggcaggtggat
tgttcaggaacaatgtatcctgctttcggcctcatgggcagcggcaagattcaactggag
gagtttatcactgctaagagactgaccttctga
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integrated database retrieval system
