Pseudochaenichthys georgianus (South Georgia icefish): 117452479
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Entry
117452479 CDS
T09629
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117452479 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117452479 (ube3b)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117452479 (ube3b)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
HECT type E3
117452479 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
117452479
NCBI-ProteinID:
XP_033947039
LinkDB
All DBs
Position
9:37338930..37349134
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AA seq
1071 aa
AA seq
DB search
MFSLTQSSKSEFLDKARQAREERRGHKDKEKSAILMQALVRRFLCRCRLQKQIRQEVDDY
FQASETGTSKRNALSTFKIARKLLFVYRPEDKMILQMFEKLCRTILASMEVENEPKVWYV
SLALSKDLTIPWLKQIKDVLWICCQLLKKLKPDILQDNKMITLYLSMLVTFTDTSTWRIV
RGKGEALRPALSRICENIMGHLNQKGFYSILQILLTNGLARSKPSLSKGTLTAIFSLSLR
PVIAAHFSDNLLRSFLLHIMSVPAVVSHLSVLTPECMASMHTHDLLRKFILFLSREEQCL
DICVCLEGSHTLCLLGNLIHLGFFSEKVLEEEANHFVKDLTDMLSYCQRYVSQKKSNLTH
WHPVLGWFSQTVDYGLNESMPLVTKQLQYLWGVAIIRTLFSDVLSKKLESQEPTPPPPQP
STSQNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTALSTLTQI
RLQILTGLTHLDELLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLAMLMLFCDCSR
HLITILDDIEVYEEQTSFKIEELLTISSFLNTFVYKMVWDGILENAKGEKLELFHSVHGW
LMVLYERDCRRRFTPDDHWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNRVLLF
RNIVTKEKESLGLVETNSASPHVTHITIRRSRMLEDGYDQLRRLPPNSIKGVIRVKFVND
LGVDEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEF
VGKMLGKAVYEGLVVDVPFASFFLSQVMGHHHTTFYSSIDELPSLDSEFYKNLTSIKRYD
GDIGDLGLTLSYDEDVMGQLVCHELIPGGKTMTVSNENKISYIHLMAHFRMHTQIKEQTA
AFIRGFRSIINPEWLHMFSTPEVQRLVAGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLW
DILSSDFTSEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRG
FFTIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtttaactcaaagctccaagtctgagttcctggacaaagccaggcaggccagg
gaggaaagaaggggacacaaggacaaggagaaatcagcaatcctcatgcaagccctggtc
cggagattcctctgtcgctgcagactccagaagcaaatacggcaagaggtcgatgactat
tttcaagcttctgaaactgggacatcaaaaagaaatgcactttcaactttcaaaatcgct
cggaaattactatttgtatatcgcccagaggataagatgattctacagatgtttgagaag
ctctgccgtacaatccttgccagcatggaggttgaaaatgaacccaaagtctggtatgtt
tccttggctctctccaaagacctcaccattccctggctcaaacagataaaagatgtgctg
tggatctgctgtcagctactgaaaaaattaaagcctgacatacttcaggacaacaaaatg
ataacgctgtacctcagcatgctggtgactttcacagacacttcaacctggcggatagtc
agagggaagggagaagctctcagacccgctttgtcgaggatttgtgaaaatatcatgggc
catctcaatcaaaagggattctactccatactgcagatcttgttgacaaatggcttggct
cgaagtaaaccatccctctccaaaggcaccctcacagctatcttctctttgtcattaagg
ccggtcattgcagctcacttctccgataacctgctaagatcattcctccttcacatcatg
tcagttcctgcagtcgtatctcacctcagtgtgcttactccagagtgtatggcgtccatg
cacacgcatgacctgctgcggaagttcatcctttttctgagccgggaggaacagtgtttg
gacatctgtgtgtgtctggaggggagccacacactctgcctacttggcaacctgattcac
ttgggtttctttagtgagaaagtcctggaagaggaggccaaccattttgtgaaggacctg
acggacatgctgtcctactgtcagagatatgtatcccaaaagaagtccaacctcacccac
tggcaccctgtcctgggctggttctcccaaaccgtagactacggtctgaatgagtcaatg
ccgctggtgactaaacagcttcagtacctgtggggtgttgctattattcggaccctcttc
agcgatgtcctctctaaaaagctggagagtcaggagcccactcctccacccccgcagcct
agcacatcgcaaaacaatctaccagtgaaaaacctcttcaagcgagcatttcagaagtct
gcttctgttcgaaacatcctgaaaccagtgggaggaaagcgagtggactcagctgaagtt
cagaaggtgtgcagcatctgtgtgctctaccagaccgctctgtccactctaacgcaaata
cgactccagatactcaccggtctgacacatcttgatgaacttttgcccaagctttgggcc
ttcatttgtgagctcggtcctcagggaggcctcaaactcttcatggagtgtctgaacaac
gacaccgaggagtccaagcagctcctggctatgctcatgctcttctgtgactgctcccgg
cacctgatcacaattctggatgacattgaagtttatgaagaacaaacatctttcaagatc
gaggaactcctcaccatctcttcatttctgaacacatttgtgtacaagatggtatgggat
ggcatcttagaaaatgctaagggagagaaactggagttgttccacagtgttcatggctgg
ttgatggttctctatgagcgggactgcaggcgacgattcacccccgatgaccactggcta
cgcaaggacctgaagcctagcctcttgtttcaagagctcgagaaaggcaagagaagagcc
cagcttttactgcagtacatcccacatgtcattccacataaaaacagagtgctgctgttc
aggaacatcgtcaccaaggaaaaggaaagtttaggattggtcgaaacaaactctgcttca
ccacatgtcacgcatattaccattcgtcgctcacggatgttagaggatggatatgaccag
ctccgcagattgccaccaaattccataaaaggcgtcattcgtgtgaagtttgtcaacgac
ctgggagtagacgaggctggtatcgatcaggatggtgtgttcaaagagtttctcgaggag
atcattaaaaaagtgttcaatcctgccctcaacctgtttaaaactacgagtgggaacgaa
aggctgtatccttcacccacatcctacatccatgagaaccatttgcagctgtttgagttt
gtggggaagatgctcgggaaagccgtatatgagggtctcgttgtggacgtcccctttgcc
tccttcttcctcagtcaggtcatgggtcaccaccacaccactttctacagctccatcgac
gagctgccctccctggactctgagttttacaaaaacctcacttccatcaagcgctacgat
ggagatataggcgatcttggactgacgttatcttatgatgaggatgtaatgggccagctt
gtctgtcatgaattgatacccggggggaaaaccatgaccgtgtccaacgaaaacaagatc
agctacattcacctcatggctcacttcaggatgcacacgcagattaaggagcaaacggca
gctttcattcggggtttccgcagcatcattaacccagagtggctgcacatgttttccacg
cctgaggttcagcgtcttgtcgctggagacaatgctgagattgatcttgatgacctcaag
aaacacaccgtctactatggaggttttcacagcagccaccgggtcatcatctggctgtgg
gacatcctgtccagtgacttcacctctgaagagagggctatgttccttaaatttgttacc
agctgctccaggccaccacttctaggttttgcctacctcaaaccacctttctccatccgc
tgtgtggaagtttcagacgatcaggacaccggagacacacttggaagtgttcttaggggc
ttttttacaatccgcaagaaggagcctggtggtcgacttcccacgtcatcaacatgcttc
aacctgctcaagttgcccaactacagcaagaagagcatcttgcgcgacaaactgcgctac
gctatcagtatgaacaccggctttgagctctcctaa
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