Pseudochaenichthys georgianus (South Georgia icefish): 117452735
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Entry
117452735 CDS
T09629
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03272
Virion - Hepatitis viruses
pgeo04382
Cornified envelope formation
pgeo04514
Cell adhesion molecule (CAM) interaction
pgeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117452735 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117452735 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117452735 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117452735 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117452735 (cldn5a)
04147 Exosome [BR:
pgeo04147
]
117452735 (cldn5a)
Cilium and associated proteins [BR:
pgeo03037
]
Other cilia and associated proteins
Stereociliary proteins
117452735 (cldn5a)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117452735 (cldn5a)
Exosomal proteins of colorectal cancer cells
117452735 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
117452735
NCBI-ProteinID:
XP_033947370
LinkDB
All DBs
Position
9:complement(22759874..22761742)
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AA seq
217 aa
AA seq
DB search
MVSAGLEILGLALCVLGSFLVMVSCGLPMWKVTAFIEANIVVAQTIWDGLWMTCVVQSTG
QMQCKMHDSLLALTHDLQAARALTVISSVMGVLGLMVVIAGAQCTNCIQGEYVKARVVNA
GGVTFIVSGLFVLVPLCWMANSIISDFYNPQVPSSKKREIGAALYIGWAASAMLLIGGSL
LCCSCPSSSNSGYSVKYAPTTKRATPNGGDYDKRNYV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggctggactggagatcctgggactagcgctgtgcgtacttggctcgtttctg
gtgatggtttcgtgcgggctgcccatgtggaaggtgacggctttcatcgaagccaacatc
gtggtggctcagacaatctgggatggcttgtggatgacctgcgtggtgcagagtacgggc
cagatgcagtgcaagatgcacgactccctcctcgcccttacccacgacctgcaggcggcc
agagcgctcacggtcatctcctcggtgatgggcgtgctggggctcatggttgtgattgcg
ggggcgcagtgcaccaactgtatccagggggagtacgtgaaagcccgggttgtgaacgcc
ggaggggtcactttcatcgtcagtggtctgtttgtgctcgtgcctctctgctggatggcc
aacagcatcatatcagacttttacaacccacaggtgccatcatccaagaagagggagatc
ggcgcggcgctctacatcggctgggctgcctcagcgatgctgctgatcggggggtcgctg
ctgtgctgctcctgcccctccagcagcaactccggatactcggtaaagtacgcaccgacc
acgaagagagccacgccgaacgggggggactatgataagaggaattacgtgtag
DBGET
integrated database retrieval system
