Pseudochaenichthys georgianus (South Georgia icefish): 117452750
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Entry
117452750 CDS
T09629
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117452750 (hnf1a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117452750 (hnf1a)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_5
HTH_37
Motif
Other DBs
NCBI-GeneID:
117452750
NCBI-ProteinID:
XP_033947392
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All DBs
Position
9:33725174..33732544
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AA seq
572 aa
AA seq
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MEERIEERAEAKPRSLTALQEQLIWALLGSGLSRDVLVQAVGELERDRASTGTERGERGD
GESSEEGEMDFPPPIFRELEKLSPEEAAKLRTEVDRLLQEDPWHVAKIVKSYMQQHNLPQ
REVVESTGLNQSHLSQHLNKGTPMKNQKRASLYTWYVKKQCEISQQFTNAKHGLGSAEEQ
GEETRKGRRNRFKWGPASLQILFHAYERQKNPSKEEREGLVEDCNRAECHQRGVSSSQLA
GLGSNLVTEVRVYNWFANRRKEEAFRNKLALDTPFPNQSASSSHLNIPSPEHVLWGLTSC
FPGMKYSQQILCDAMSSARGSVGEIVGRLVVSPVQLEPSHTLLETHNPKLVSSGGPLPPV
STLTSLHSLSASTASSQGLIMASLPSVMSLGESSLLIGLASGQPKSMPVINNMGGGFTTL
QPISFQQQLHGSPQQHISHQLQSHMGASPFMATMAQLPCHMYNKSDSPQYHSVPSSLLSQ
AMVITEGSSLGTLTSLTAVRQILTADPEELTNSPLQEDSRHMQPQTPVPASSESLELYPA
SQTTASHQSLLLSPSPTDISSYIPTQMVSTAQ
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaggatagaggagcgggccgaggccaagccgcgcagtttgaccgcccttcag
gagcagctgatctgggccctgctgggatctggcctgtcccgggacgtcctggtccaagcc
gtaggggaactggagcgagacagggcgagtactggcaccgagaggggcgagaggggggat
ggagagagctcagaggaaggagaaatggatttcccaccacctatattccgagagctggag
aagctttcccctgaggaggcggccaaactgaggactgaagtggaccggctactgcaggag
gacccctggcacgttgctaaaattgtgaaaagctacatgcagcagcacaacctccctcag
agggaggtggtggaatccacagggctcaaccagtcccatctctcccagcacctcaacaaa
ggcacgcccatgaagaaccagaagagagcgtctctgtacacctggtacgtcaagaagcag
tgcgagatcagccagcaatttaccaatgccaaacatggccttggatctgcagaggagcaa
ggagaggaaacaaggaaaggacggaggaacaggtttaaatggggtccagcctccctgcag
atcctcttccacgcctacgagcgacagaagaaccccagcaaggaggagagagaggggtta
gtggaggattgtaacagggcagagtgccatcagaggggagtgtcgtcctcgcagctcgcc
ggcctgggctctaacctggtcaccgaggtccgagtgtacaactggtttgcaaaccgccgc
aaagaggaggcctttcgcaacaaactggctctcgacacacctttccccaaccaatctgcc
tcctcctctcacctcaacatcccgagtccagagcatgtgttgtggggcctgacttcttgt
tttccaggtatgaaatacagccagcagatcctgtgtgacgcgatgagctctgcacggggg
agcgtgggggagatagtgggacgtctggtggtcagccctgtacaactggagcccagccac
acactcctggagacgcacaaccccaaactggtgtccagcggaggccctctgcctcctgta
agcactctgacctcgctgcacagcctgtctgcctccaccgcttcctcccagggcctcatc
atggcctcactgcccagcgtcatgagcctgggggagtcctcgcttctcattggtttagcc
tctgggcagcccaagagcatgcctgttatcaacaacatggggggcgggttcaccactctc
cagccaatctcgttccagcagcagcttcacggctctccccagcagcacatatcacaccag
ctccagagccacatgggggccagccccttcatggcaaccatggcgcaactgccatgccac
atgtacaacaagtccgattcgccccagtaccactcagtaccatccagtctgctgtcccaa
gccatggtgatcactgagggcagcagcctggggacgctgaccagcctcactgctgtcaga
cagattctaacagcagatcctgaggaacttacaaactctcctttacaagaagactctcga
catatgcagccacaaacacctgtgccagcttcatccgagagcctagagctgtatcctgct
tctcagacgacagcaagtcatcagtctctcctcctctcaccttcaccaacagacatcagc
tcctacatccctacacaaatggtctccactgcgcagtag
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