Pseudochaenichthys georgianus (South Georgia icefish): 117452925
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Entry
117452925 CDS
T09629
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03030
DNA replication
pgeo03410
Base excision repair
pgeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117452925 (pole)
03410 Base excision repair
117452925 (pole)
03420 Nucleotide excision repair
117452925 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgeo03032
]
117452925 (pole)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117452925 (pole)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117452925 (pole)
DNA replication proteins [BR:
pgeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
117452925 (pole)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
117452925 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo1
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
117452925
NCBI-ProteinID:
XP_033947636
LinkDB
All DBs
Position
9:complement(37249101..37273121)
Genome browser
AA seq
1925 aa
AA seq
DB search
MPFVETRAALHGLDMYKEIGFQKDNQGEYKSTQAIHMDCYRWVKRDSYLPVGSHNLKAAA
KAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPME
PDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKMTGDGHVMDSETYVGGHVEALE
SGVFRSDIPCRFKMNPAAFDFLLQRVERTIRHAIEEEEKIPLDQVTNFNEVCEDIKKKLI
SLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKHGATCQRKMA
WQWRGEIMPASRSEFHRIQQQLESEKFPPYFPNGPPRAFHSLNREEQAKHEKKRLADYCK
RAYKKTHVTKLEERTTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSAAQESGDA
AEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGANIITQARE
LVEQIGRPLELDTDGIWCVLPNTFPENFVIKTNNEKKPKVTISYPGAMLNIMVKDRFTND
QYHELVDPATLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAEL
KGFEIKRRGELQLIKIFQSSVFEAFLKGTNLEEVYASVAKVADYWLDVLYSKAANMPDQE
LFELVSENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVISRKPEGAP
VTERAIPLAIFQAEPSVKKHFLRKWLKMPSIHDFDIRSILDWNYYIERLGSAIQKIITIP
AALQQVKNPVPRVRHPDWLHKKLLEKNDVFKQKKISELFTSEGKRQVAHQPLEAGQTADI
EDFGMPPRPLQPAILISTKRKRASQAEKSQVESQDVELTQSWREILGAPPAVGNSREEIL
VWLRYHKKKWELQLRQRKERKKRRRLLDGEAQPVGGGVIRDQGPTGGLGSFLRKTARSIL
DMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGATYKKVNRM
LPRSNIVYFLYEYSVPEDMYLKHINEINADLAAPDIEGVYETQVPLLFRALVQLGCVCMV
NKHVVRDMAGREADTFDLENLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALFGLFIPSQ
RKASVFILDTVRTNQMPNLTNLYTAERIALLEKTSEELLPPEKHNFEVRAENDPKAIYRA
LQRILLNYKEERRGPTLIAVQSNWELGRLAAGMPVLEEFPVVPVHVVDEISYNVLDWQRH
GARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKHNHLLWLS
PTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTILQSQHVND
MEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSMVVGWVREIT
QYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVSEFKRLGSTVVYGN
FNRIMLCTKKRRIDDAISYVEYITNSIHSREIFHSLSISFSRCWEFLMWMDPSNFSGVKG
KLPSSLVSGEDGAKQKKKSRGEGDEEGSEDEEDDPVEEDDGDGETDEVEELIESNWNIMQ
YLPETASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGGTPVKRRGGSQATQQAVGDLSAL
PGMIVFSQEYVSSELTQNFFTITQKIQKKVTGTRGVNQPSEMFPVLPGSHLLLNNPALEF
IKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSMQAQFSDPCNSYILPEVICHQCNFC
RDLDLCKDPTVAQDGSVLPQWFCSNCQTQYDTESIEMALVEALQKKMMSYTLQDLVCTKC
KGVKEANMPLYCKCAGDFILTFSAKSLFDQITVFRNIASHYSMSYLEETIDWLLVMSPQI
SQSAL
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgttgagacccgagctgctctccatggactcgacatgtacaaggagattggt
ttccagaaagataaccagggagagtacaagtccacgcaagccatccacatggactgctac
aggtgggtaaagagagacagctacctgccggtgggaagtcataatctgaaggcagcagcg
aaagctaaactgggctacgaccccgtggagctggacccggaggatatgtgtcgcatggcc
actgagcagccacagactttagccacctactctgtgtcggacgctgtggccacgtattac
ctctacatgaaatacgttcaccccttcatcttcgctctgtgcaccatcatccccatggag
ccggacgaggtgctgcgtaaaggctctgggacgctgtgcgaggccctgctcatggttcag
gccttccacgcaaacatcgttttccccaacaagcaggagcaggtgttcaacaaaatgacc
ggcgacggccacgtcatggactctgagacctacgtgggcggccacgtggaggcgctggag
tccggagttttccgcagtgacatcccttgccgtttcaaaatgaacccggccgcgtttgac
ttccttctgcaaagagttgagagaaccattcgtcacgccattgaggaagaggagaaaatc
cctttagatcaggtcaccaactttaatgaggtttgtgaggatatcaaaaagaagctgata
tccttaaaggaggtcccaaacaggattgaatgccccctcatctaccatctggacgttggg
gctatgtaccccaatatcatcctcaccaaccgcctgcagccgtccgccatagttgatgag
gccacttgtgccgcctgtgactttaacaagcatggtgccacctgccagaggaaaatggcc
tggcagtggagaggggagatcatgcctgccagccgcagtgagtttcaccgaatccagcag
caactcgagtctgagaagttcccgccctatttccccaacggcccacctcgggccttccac
tctctcaacagggaggagcaggccaaacacgagaagaaacgtctggcagactactgtaag
agggcctacaagaagacacacgtcaccaagctggaggagcgcaccaccaccatctgtcag
agagagaactccttctacgtcgacaccgtgagagctttcagagatcgtcgctacgaattc
aaaggactccacaaggtgtggaagaagaagctgtcggctgctcaggagagcggagacgcc
gctgaggtgaagcgctgcaaaaacatggagatcctgtacgattctcttcagctggctcac
aagtgtattctcaactctttctatggctacgtcatgaggaaaggggcgcgctggtactcc
atggagatggctggcattgtgtgcttcactggagccaacatcatcactcaggccagagag
cttgtggaacaaatagggaggcccctggagttggacactgacgggatctggtgcgtcctc
cccaacaccttccccgagaactttgtgattaaaaccaacaatgagaagaagcccaaggtg
accatctcctaccccggagccatgctgaacatcatggtgaaggaccgattcaccaacgat
cagtaccacgagctggtcgaccccgcgaccctcacttacgaaaccagggccgagaacagc
atcttctttgaggtggatggaccgtacctggccatgatcctgcccgcatccaaggaggaa
gggaagaagctgaagaaaaggtacgctgtgtttaatgaggacggctccctggctgagctg
aagggtttcgaaattaagagacgaggagagctgcagctcattaagattttccagtcgtcg
gtgtttgaggctttcctcaaaggcaccaatctggaggaggtgtacgcctctgtggccaaa
gtggccgactactggctggacgttctgtacagcaaggctgccaacatgccagaccaggag
ctgtttgaactggtttctgagaatcgttcgatgtccagaaagctggaggactacggagag
cagaagtccacctccatcagcacagctaagagactggcggagttcctgggagaccagatg
gtgaaagatgctggtctgagctgtcgctacgtcatctcccggaaacctgagggtgcgcct
gtcacagagagagccattcctctggccatcttccaggcggagcccagtgtgaagaagcat
ttccttcgtaagtggctgaagatgcccagcattcatgactttgacatccgctcgatcctt
gattggaattattacatagagcggttgggtagtgccatccagaagatcatcaccatccct
gcagctcttcaacaggtgaagaatccggtacccagagtgaggcaccctgattggctgcac
aagaaacttctggagaaaaatgatgtcttcaagcagaagaaaatcagtgagctgttcacc
agcgagggcaagagacaggtggcccatcagcctctggaagcaggtcaaaccgcggacata
gaggactttgggatgccccccagacctctgcagccggccatcctcatcagcaccaagcgc
aaacgggcgtctcaggcagagaagagccaagtggagtcgcaggatgtggagctcactcag
tcctggagggagatcctgggggcgcccccggctgtgggaaactcacgggaggagatcctg
gtgtggctgcggtaccataagaagaagtgggagctgcagctgaggcagaggaaggagaga
aagaagaggaggaggctgctggatggtgaagctcaacccgtgggggggggagtgatccgg
gatcagggccccaccggcggcctggggagcttcctccgcaaaacagcacgcagcatcctg
gacatgccatggcagattgtgcagattgcagagaccagtcaccccggcctgtacaagctg
tgggctgtgattggaaacgacctccactgcatgaagctcaacatcccacgtgtcttctat
gtcaatcagaaagtcccaaaacaggaggagggtgccacctacaaaaaggtgaaccgcatg
ctgcctcgctccaacatagtgtacttcctttatgagtacagtgtaccagaagacatgtac
ctgaagcacatcaacgagatcaacgctgacctcgcggcccccgacatcgaaggagtctat
gaaacacaggtcccgttgctgtttcgtgcgctggtgcagctcggatgtgtgtgtatggtt
aataaacatgtggtgagggatatggctggcagggaggcggacacctttgacctggagaat
ctggagatgaggtctctggcccagttcagctacctggagcctgggagtgttcgccacatg
tacctgtatcatcacagtcagggtcacaaggctctgttcggcctcttcatcccctcgcag
cgcaaagccagcgtcttcatcctggacactgtcaggaccaaccagatgcccaacctgact
aacctctacacagccgaacgcattgctctcctggagaagaccagcgaggagctcctgcct
ccagagaaacacaactttgaggtccgcgctgaaaacgatccaaaggctatttaccgtgca
ctgcaacgcattctgctaaactacaaggaggagcgtcgcgggcccacgctcatcgcagtg
cagtcaaactgggagttggggcggttggcagcagggatgccggtgcttgaggagtttcca
gtggttcccgtacatgtggttgatgagatcagctataacgtgctggactggcaacgccac
ggtgcccggcgcatgatccgccactacctcaacctggacagctgcctgtcacaggccttc
gacatggccaggtattaccacttacctgtggggaacttgcctcaggatgtgtccatcttt
ggctcagatctgttcctggcacgacatctgaggaaacacaaccacctgctgtggctctcc
cccaccgccaggccagatctgggaggaaaagaggccgatgacagtcgtctggtgatggaa
agtgatgacaggggctcggtggagatcaatgctcaaggatgctattccacagtgtgtgtg
gagttggacctgcagagccttgcggtgaacaccatcctccaatcacaacatgtcaacgac
atggagggcggggctagcttgggtgtcagttttgatgtgatccagcaggcctcgttggag
gacatgatgtcagggaaccagggagccagcgctctggccagctatgatgagactgctctc
tgctccaacaccttcaggatcttgaagagcatggtggttgggtgggtcagagagatcaca
cagtaccacaacgtgtatgcagacaaccaggtgatgcacttctaccgctggctgcgctcc
cccagctctctgctctacgaccccgccctgcaccgcaccctgcacaacatgatgaagaag
gtgtttctacagttggtttcagagttcaaacgtctcggctccactgtggtgtacggaaac
ttcaacaggatcatgttgtgcactaaaaaacggaggatagatgatgccattagttatgtg
gagtacatcaccaacagcatccactccagagaaatcttccactctctgtccatctccttc
tcccgatgctgggagttcctgatgtggatggatccgtcaaacttcagcggtgtgaagggc
aaactgccctccagcctcgtgagcggggaggacggagccaaacagaagaaaaagagccga
ggagagggagatgaggaaggcagtgaggatgaggaggatgatccagttgaggaagatgat
ggtgatggtgagacggatgaagtggaggagctcattgagagcaactggaacatcatgcag
tatctccctgaaactgcctcctgtcagaaatacttcctcatgattgtctccgcctacatt
gcagcagtgtaccacagcatgaaagaggagctgagacgcaacgctcctggaggcacgccg
gtcaagaggcgtggaggcagccaggctacccagcaggccgtgggggacttgagtgccctt
cctggaatgatcgtcttctcccaggaatacgtgtccagtgagctgacacagaactttttc
accatcactcaaaaaatccagaagaaggtgacgggtaccaggggggtcaaccagccctcg
gagatgttccccgtcctgcctggatcccacctgcttctcaacaacccagcactggagttc
atcaaatacgtctgccaggtcctgtcactggatgccaacatagtgaaccaggtgaacaag
ctgaagagagacctcctgcgtctcgtggacgtcggagagttttcaatgcaagcccagttc
agtgacccgtgtaactcctacatcctgccagaggtcatctgccaccaatgcaatttctgt
cgtgacctcgacctctgcaaggacccaactgtggcacaggatgggtccgtcttgcctcag
tggttctgctcaaactgccagacgcaatatgacactgagtctattgagatggctctggtg
gaagctctgcagaagaaaatgatgagctacacactgcaggatctggtgtgcaccaaatgt
aaaggagtgaaggaagcaaacatgccgctgtactgcaaatgtgccggagacttcatcctc
accttctcagccaagagcctctttgatcagatcacggtgtttcggaatatcgcatcccac
tacagcatgagctacctggaggagacgatcgactggctgctcgtcatgagcccacagatc
agccagagcgctctctga
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integrated database retrieval system
