KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117452974
Entry
117452974         CDS       T09629                                 
Symbol
ciao1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pgeo03036]
    117452974 (ciao1)
   03400 DNA repair and recombination proteins [BR:pgeo03400]
    117452974 (ciao1)
Chromosome and associated proteins [BR:pgeo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    117452974 (ciao1)
DNA repair and recombination proteins [BR:pgeo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117452974 (ciao1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd EIF3I Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 NBCH_WD40 WDR90_beta-prop_4th eIF2A Beta-prop_DCAF12 Beta-prop_HPS5 WD40_MABP1-WDR62_1st B-prop_COPA_B_2nd Beta-prop_TEP1_C Beta-prop_ELP1_1st Beta-prop_NUP159_NUP214 Beta-prop_SPT8 RMC1_N Lactonase
Other DBs
NCBI-GeneID: 117452974
NCBI-ProteinID: XP_033947690
LinkDB
Position
9:30772377..30776529
AA seq 331 aa
MKPSLTPVQKLVAHPDSRCWFVSWNPTGTLLASCGGDKAIRIWGLEGDSWVCKTVLQDGH
QRTVRKVAWSPCGKYLASASFDATTCIWKKKNDDFESLTVLEGHENEVKCVAWAPSGNLL
ATCSRDKSVWVWEVDEEDEYECVTVVNSHTQDVKHIVWHPNQELLASASYDNNICIYKEE
DDDWECKATLQGHTSTVWSLAFDPSGERLASCSDDRTVKIWKESPNQSEQGDLSWKCVCT
LSGFHGRTVYDISWCRLTGALATACGDDAVRVFMEDETADPEQPVFSLAAQVTRAHNQDV
NCVSWNPKEAGLLASCSDDGDITIWRFQPED
NT seq 996 nt   +upstreamnt  +downstreamnt
atgaagccgtctctgactccggtacagaagctggtcgcccacccggactcccgctgctgg
ttcgtcagctggaacccgaccgggaccctgctggcctcctgcgggggggacaaggccatc
cggatctggggactggagggagactcttgggtttgtaagactgtgcttcaggacggacac
cagcgcacggtgaggaaagtggcctggtctccctgtgggaagtatctggcctctgccagc
tttgatgcaaccacatgcatctggaaaaagaagaacgatgactttgagagtttgacagtg
ttggaaggacatgaaaacgaggtgaagtgtgtggcgtgggccccttcagggaacctgctg
gcaacatgtagccgagacaagagcgtctgggtgtgggaagtggatgaagaagacgagtat
gagtgtgtaactgttgtgaactctcacacacaagatgtcaagcatatcgtgtggcatcca
aatcaggagctcctggcttccgctagctacgacaacaacatttgtatttacaaggaggag
gacgatgactgggagtgtaaggccacgctgcagggacacacctccacagtctggagtttg
gcgttcgatccgtctggagagcggctcgcctcctgcagtgacgaccgcaccgtcaagatt
tggaaagagtctccaaaccaaagtgaacagggagacttgtcgtggaagtgtgtttgcact
ctgtctgggttccacggacgaacagtgtacgatatctcctggtgtcggctgacaggtgcg
ctggccaccgcctgcggggacgatgcagtgagagtgttcatggaggacgagacggctgac
ccggagcagccggtgttctctctcgctgcccaggtgaccagagctcataaccaggacgtc
aactgtgtgtcctggaaccccaaggaggcgggactcctcgcctcctgcagcgacgacgga
gacatcaccatctggaggtttcagccagaagactga

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