Pseudochaenichthys georgianus (South Georgia icefish): 117452984
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Entry
117452984 CDS
T09629
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pgeo01100
Metabolic pathways
Module
pgeo_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117452984
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgeo01003
]
117452984
Enzymes [BR:
pgeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
117452984
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
117452984
Glycosyltransferases [BR:
pgeo01003
]
Glycan extension
O-Glycan
117452984
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
RmuC
DUF7365
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
117452984
NCBI-ProteinID:
XP_033947699
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Position
9:23388392..23394237
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AA seq
532 aa
AA seq
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MFKRWLLALVARVGLIVLGLCCCLFLFYLLACKPASHSSQQSLSWSAGATSREGYMALLQ
EREESHRHYMNSLSKQIAQLKEALQERTQQLQETLEKAKTRGILPQGLESLHKTLTQTDM
KEFFRSQLSQAEVNSGVKLPSEYAVIPFDTFTLRRVYQLETGLTRHPEERPVRKDHRDEL
ISTLETALHVLNGPQQHTDNTRRKRTYSPADFIEGLTRTERDRGTVYELMFKGDGPRGFT
QVVLFRPFGPVLKVKSESVNTRSTLINIIVPLSKRPEAFRQFINNFREVCIQKDSRVHLT
VVYFGRDQIDQVKAVLDQTTRETRFRSFTLIQLNEEFSRGRGLEVGARAWRRGQNALLFF
CDVDIHFTPDFLTSCRLNAEPGKRVYYPVLFSQYNPSIIYSNQSLLPPVQQQLVIKKDTG
FWRDFGFGMTCQYRSDFLNIGGFDRSIKGWGLEDVHLYRKYLHSKLMVIRSPSRGLFHLW
HEKDCADELPPDKYKMCMQTKAINEASHGQLGELLFKPEIEAHLGKQKNQGT
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacggtggcttttggccctggtggcccgggtcggcctcattgtgctgggcctc
tgctgctgtctgttcctgttctacctcctcgcctgtaaacctgcgtcacacagcagccag
caatctctttcttggtctgcgggggccaccagtagggagggatacatggctttgttgcag
gaaagagaggagtctcacagacattacatgaacagcctgagcaagcagatagcccagctg
aaggaagctctgcaggaaaggacgcagcagcttcaggagaccctggaaaaggctaaaaca
agagggattctgcctcagggtctggagagtttgcacaaaaccctgacacagaccgacatg
aaggagttcttccgctcccagctgagccaggccgaggtgaactcaggtgtgaagctgccc
agcgagtatgcagtgattcctttcgacactttcactctgaggagggtgtaccagctggag
acggggttgacaagacacccagaagagaggcctgtgaggaaagatcacagggacgagctg
ataagcacgctggagacagctctgcacgtcctgaacgggccgcagcaacacacagacaac
acaaggcggaagcgcacatactcccctgcagacttcattgaggggttaacccgtactgag
cgggacagaggaactgtttatgagctgatgtttaaaggcgacggcccacggggcttcaca
caggtcgtcctcttcaggccgtttggtcccgtgctgaaggtgaagagcgagagcgtgaac
acgcgcagcacgctcatcaacatcattgtacctctgtccaagaggccggaggctttcagg
caattcatcaacaacttcagagaagtgtgcatccagaaagacagcagggttcatctgact
gtggtctactttggtcgagatcagatagatcaggtgaaggcagtcctggatcagaccacc
agagaaactcggttcaggagcttcactctgatccagctgaatgaggagttttctcgtggt
cgagggttggaggtgggcgcccgggcgtggaggcgcggccagaacgctctgctcttcttc
tgtgatgttgacatccacttcacccctgacttcttaacttcttgtcgtctcaatgcagaa
cctggtaagagagtgtactacccagtgctcttcagccagtacaacccgtctattatctac
agtaatcagagtcttttacccccagttcaacaacaactggtgataaaaaaagacactgga
ttctggagagactttgggtttggtatgacatgccagtacaggtctgatttcctcaacata
gggggttttgaccgcagcatcaaaggctgggggttggaggacgtgcacctgtacaggaag
tacctccacagtaagctaatggtgattcgctctccatcccggggccttttccacctgtgg
cacgagaaggactgtgcagacgagctccctccagacaaatacaagatgtgtatgcagacc
aaagccataaacgaggcatcgcacggccagctcggggaacttttattcaaaccagagatc
gaagctcatttgggcaagcagaaaaaccaaggaacatga
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