Pseudochaenichthys georgianus (South Georgia icefish): 117452993
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Entry
117452993 CDS
T09629
Symbol
vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04140
Autophagy - animal
pgeo04142
Lysosome biogenesis
pgeo04145
Phagocytosis
pgeo04148
Efferocytosis
pgeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
117452993 (vps33a)
04142 Lysosome biogenesis
117452993 (vps33a)
04140 Autophagy - animal
117452993 (vps33a)
04148 Efferocytosis
117452993 (vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117452993 (vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117452993 (vps33a)
Membrane trafficking [BR:
pgeo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117452993 (vps33a)
Hops complex
117452993 (vps33a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
RMD9_mid
Motif
Other DBs
NCBI-GeneID:
117452993
NCBI-ProteinID:
XP_033947710
LinkDB
All DBs
Position
9:30653851..30661179
Genome browser
AA seq
600 aa
AA seq
DB search
MAAHLSYGRVNLNILREAARKELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKSGRLPAADVKNIIFFVRPRLELMDIIAENIISEDKMHSPRDFHILFVPRRSML
CEQRLKEQGVLASFINIEEYILDLIPYDGDLLSMEYESAFRECYLENDQTSLYHTAKGLM
TLQALYGTIPQIYGKGECARHVANMMLRMKREFAGSQNQILPVFDTLLLLDRNVDLLTPL
ATQLTYEGLIDEVYGITNGYVKLPPEKFAQKKQGEASKDLPTEPKKLQLNSAEELYAEIR
DKNFNAVGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAEL
IKDITTSEAFFDNLTVEQEFMTGVETDKVNTYIEDSIAQKDPLIKILRLVSMQSVCNNGL
KQKVFDYYRREILQTYGYEHILTLNNLEKAGLLKLQSNSRNNYPTIRKTLKLWMEDANEQ
NPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQQLPAGLHKKRQQG
ENRTTLVFFLGGVSYAEIAALRFLSQMEDSGMEYIIATTKLLNGTTWIKSLMDRPEAQTS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccacctatcgtacggtagagtcaatttaaacatcttgagagaagctgcacga
aaagagcttcgagagtttttggacaaatgtgcgggaagtaaggccatagtttgggatgaa
tatctgacgggaccttttggactgatagctcaatactctctactgaaggaacatgaagtt
gaaaagatgttcaccctcaagagtggcagactccccgctgctgacgtcaagaatatcatc
ttctttgttcgtcccagactggagctcatggacatcatcgctgagaatatcatcagtgag
gacaagatgcattccccacgagacttccatattttgtttgttcctcggcggagcatgctg
tgtgaacagcggctgaaggagcagggcgtgttggcctccttcatcaacatcgaagagtac
atcctggacctgatcccctatgatggagacctgctctccatggagtatgagagtgctttc
agggagtgctacttagaaaatgaccaaaccagcctctaccacactgccaaaggcctcatg
accttacaggccctgtatggcaccattccacagatatacgggaaaggagaatgtgcaagg
catgttgccaacatgatgctgaggatgaagagggagtttgccggcagtcagaatcagatc
ctgcccgtgttcgacactctactcctcctggaccgcaacgtggacctgctcactcctctg
gccacgcagctcacctacgagggactcatcgacgaggtctatggaatcactaacggttac
gtcaagttgcctcctgagaaatttgctcagaagaagcaaggagaggcgagtaaagatttg
cccacagagcccaagaagctacagctaaactcagcagaggagctgtacgcagaaatacgt
gacaaaaacttcaacgcggtcggagcagcgctcagcaagaaggccaaaataatttcagca
gcctttgaggagcgtcataatgctaaaacagtgggagaaatcaagcagtttgtgtctcag
ctgcctcacatgcaggcagctcgaagttcgctggctaaccacacttctatagccgaactg
atcaaggacatcaccacatctgaggccttcttcgacaatctgacagttgagcaggagttt
atgactggagtagaaacggacaaggtgaacacgtatatagaagacagcattgcccaaaag
gatccactgatcaagattctgcgcctggtttccatgcagtcggtctgcaacaacggcctc
aagcagaaagtgttcgactactacaggagggagatcctgcagacctatggttatgaacac
atactgacactgaacaacctagagaaggcgggtcttttgaagcttcagtcaaactcaagg
aacaactaccccactataagaaaaaccctcaaactgtggatggaggatgccaatgaacag
aaccccaacgacatctcctacgtgtacagtggctacgctccactaagcatccgactgacc
caggtgttagccaggcccgggtggcgcagcatcgaagaggtgctgaagatgcttccaggc
ccgcactttgaggagagacagcagctgcccgccgggttgcacaagaaacgtcagcagggg
gagaatcgaaccacgctggtgttcttcctcggaggagtgtcgtatgcagaaatagccgct
cttcgtttcctctctcaaatggaagacagcgggatggagtatattatagccaccacgaaa
ctcctaaacggtacaacatggatcaaatccctcatggaccggcccgaggcccagacctcc
tga
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