Pseudochaenichthys georgianus (South Georgia icefish): 117453239
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Entry
117453239 CDS
T09629
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117453239
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117453239
04090 CD molecules [BR:
pgeo04090
]
117453239
04091 Lectins [BR:
pgeo04091
]
117453239
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
SIGLEC family
117453239
CD molecules [BR:
pgeo04090
]
Proteins
117453239
Lectins [BR:
pgeo04091
]
I-type lectins (Siglecs)
117453239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_5
Ig_4
C2-set_2
PKD
Ig_CD22
PKD_4
CBM_56
Motif
Other DBs
NCBI-GeneID:
117453239
NCBI-ProteinID:
XP_033947997
LinkDB
All DBs
Position
1:46664618..46673696
Genome browser
AA seq
456 aa
AA seq
DB search
MRGAAMSFTAAASGLVVFLLSVSVVQSQYGMTYSSTKICAVKGSTVEIRCSYTYPSTSNG
HVNTVEKTCWFTTWKDLKPVDVTTDSEYAGRVEDLCENNTCTLRIKNLTESDSVEYWFSI
KTRQYTHLGVPGTTLSVTDAPKPPSVSVSPSAEIEEGSSVTLTCSSDANPAANYTWYKED
GNADLSFVSEGPRLFLSSIQSSDSGQYYCTADNLLGSRRSEPIFIDVTYAPKLPSVSVSP
PAEIEEGSSVTLTCSSDANPAANYTWYKMNGNRKLPPLTTEPKLFFSSFQVSDSGKYYCR
ADNLLGSRRSESISIDVKYAPKLPSVSVSPSAEIKEGRSVTLTCSSDANPAANYTWYKED
EDSLKASGQIFTITDFRAEHSGSYSCGAQNKLGRSNSTLTLIVVAGSSTMTVNIIGTTLG
VLMLILVFLLSLWMRKKKALHSTTEAHEPVEIETLT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagcagctatgagtttcactgcagcagcaagtggattagttgtcttcctgctc
tctgtgtcagtggttcagagtcagtatggcatgacttactcttctactaagatctgtgca
gtgaaaggatcaacagtggagataagatgcagctacacatacccatcaacatcaaatggt
catgttaacacagtggagaaaacatgctggttcactacatggaaagatcttaaacctgta
gatgtgaccacagactcagagtatgcaggtcgtgtagaggatctctgtgaaaacaacacc
tgcactctgagaatcaaaaacctgacagagagcgactcagttgagtactggtttagcatc
aaaacaaggcaatatacccacttgggtgttcctggaaccactctgtctgttacagatgct
ccaaagcctccctctgtgtcagtgagtccctctgctgagatagaggagggcagttcagtg
actctgacctgtagcagtgatgctaacccagcagctaactacacctggtacaaggaggat
ggaaatgcagacctttcttttgtcagtgaaggaccacgtcttttcctcagctccatccag
tcctctgactctggacagtattactgtacagctgacaatctgctggggagtcgaagatct
gaacccatctttattgatgtgacatatgctccaaagctcccctctgtgtcagtgagtccc
cctgctgagatagaggagggcagttcagtgactttgacctgtagcagtgatgctaaccca
gcagctaactacacctggtacaagatgaatggaaatcgtaaacttcctcctctcactaca
gaaccaaagcttttcttcagctccttccaggtttctgactctggaaagtattactgcaga
gctgataatttgctggggagtagaagatctgaatccatctctattgatgtgaaatatgct
ccaaagcttccctctgtgtcagtgagtccctccgctgagataaaggagggccgttcagtg
actctgacctgtagcagtgatgctaacccagcagctaactacacctggtacaaggaggat
gaagactctctaaaagcttcaggacagatcttcaccatcactgacttcagagctgaacac
agtgggagttattcctgcggagcccagaacaagttaggacgtagcaactccaccttaact
ctgattgttgtggcagggagttcaacaatgacagtgaatatcatcgggacgactctgggg
gtcttgatgctgattcttgtgtttctcctgagtctgtggatgaggaagaagaaagctctg
cactccaccactgaagcacatgaacctgtagagatagagacgctcacctga
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